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Explainable Transformer-Based Framework for Glaucoma Detection from Fundus Images Using Multi-Backbone Segmentation
Hind Alasmari1, Ghada Amoudi1, Hanan Alghamdi1
1Department of Information Systems, Faculty of Computing and Information Technology, King Abdulaziz University, Jeddah 21589, Saudi Arabia.
Diagnostics (Basel, Switzerland)
|September 27, 2025
Summary
This study introduces an explainable AI pipeline for automated glaucoma diagnosis using fundus images, achieving high accuracy in optic nerve head segmentation and classification. Vision Transformers show promise for biomarker-driven glaucoma screening.
Area of Science:
- Ophthalmology
- Medical Imaging
- Artificial Intelligence
Background:
- Glaucoma, a leading cause of irreversible blindness, is increasing globally, exacerbated by a shortage of specialists.
- Early diagnosis and intervention are crucial to prevent vision loss.
Purpose of the Study:
- To develop an explainable, end-to-end AI pipeline for automated glaucoma diagnosis from fundus images.
- To evaluate Vision Transformers (ViTs) against traditional Convolutional Neural Network (CNN) models for glaucoma diagnosis.
Main Methods:
- Utilized YOLOv11 for optic disc detection and U-Net/MaskFormer for optic disc/cup segmentation across three datasets (REFUGE, ORIGA, G1020).
- Employed ResNet50, VGG16, MobileNetV2, and Swin-Base backbones for segmentation.
- Classified glaucoma based on the vertical cup-to-disc ratio (vCDR) using explainable AI principles.
Main Results:
- MaskFormer achieved superior segmentation performance (IoU/DSC scores >88%).
- The classification model reached 84.03% accuracy and 84.56% F1-score.
- Vision Transformers demonstrated high segmentation performance with explainable, biomarker-driven diagnosis.
Conclusions:
- The proposed framework offers a transparent and trustworthy solution for glaucoma screening by leveraging interpretable features like vCDR.
- Explainable AI and Vision Transformers present a promising direction for accurate and reliable automated glaucoma diagnosis.

