A Comprehensive Review of Digestive Endoscopy-Associated Infections: Bacterial Pathogens, Host Susceptibility, and

Deniz Günșahin1,2, Vasile Șandru1,2, Gabriel Constantinescu1,2

  • 1Faculty of Medicine, Carol Davila University of Medicine and Pharmacy, 050474 Bucharest, Romania.

Microorganisms
|September 27, 2025
PubMed

Insights

Gastrointestinal endoscopy infections are rare but serious. This review covers infection risks, transmission, and prevention, highlighting duodenoscopes and patient factors, emphasizing improved reprocessing and guidelines for patient safety.

Area of Science:

  • Gastroenterology
  • Infectious Diseases
  • Medical Device Reprocessing

Background:

  • Gastrointestinal (GI) interventional endoscopy is vital but carries infection risks.
  • Post-procedural infections, though rare, have serious consequences and are a growing concern.
  • Duodenoscopes are a significant source of exogenous infections, often with multidrug-resistant organisms.

Purpose of the Study:

  • To provide a comprehensive overview of infections associated with GI endoscopy.
  • To discuss transmission, microbial agents, host susceptibility, and prevention strategies.
  • To highlight diagnostic and therapeutic approaches for post-endoscopic infections.

Main Methods:

  • Narrative review of literature on GI endoscopic infections.
  • Analysis of transmission mechanisms, microbial agents, and host factors.
  • Evaluation of current and emerging preventive, diagnostic, and therapeutic strategies.

Main Results:

  • Infections are infrequent but clinically significant, especially after procedures like ERCP and EUS.
  • Multidrug-resistant bacteria (e.g., Klebsiella pneumoniae, Pseudomonas aeruginosa) are common pathogens.
  • Risk factors include advanced age, male sex, immunosuppression, and specific comorbidities like cholangiocarcinoma and liver cirrhosis.

Conclusions:

  • Improved reprocessing methods (e.g., ethylene oxide, automated reprocessors, single-use devices) can reduce infection rates.
  • Enhanced awareness, infection control, and adherence to guidelines are critical for patient safety.
  • Multidisciplinary strategies, including surveillance and device innovation, are needed to manage evolving infection challenges.

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