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Updated: Jan 16, 2026

Sedimentation Equilibrium of a Small Oligomer-forming Membrane Protein: Effect of Histidine Protonation on Pentameric Stability
Published on: April 2, 2015
Structural Evolution of Protonated Phenylalanine Induced by Stepwise Hydration
Han Jun Eun1, Il Tae Yoo2, Shun-Ichi Ishiuchi3
1Gas Metrology Group, Division of Chemical and Material Metrology, Korea Research Institute of Standards and Science (KRISS), Daejeon 34113, Korea.
Abstract:
We investigated the structural evolution of protonated phenylalanine ions (H+Phe) upon stepwise hydration using cryogenic ion spectroscopy. H+Phe ions were generated by electrospray ionization and introduced into a reaction trap containing water vapor at 130-170 K to form hydrated complexes, H+Phe(H2O)n (n = 1-5). Subsequently, these complexes were cooled in a cryogenic ion trap at 4 K and analyzed by ultraviolet photodissociation (UVPD) spectroscopy. The UVPD spectra exhibited well-resolved vibronic bands near the origin bands of the S0-S1 transitions. To determine the number and structures of distinct conformers, we employed IR photodissociation and IR ion-dip spectroscopy in conjunction with quantum chemical calculations. The first water molecule binds exclusively to an NH bond of the protonated NH3+ group, while the second and third water molecules bind either to the remaining NH bonds or to the OH group of the carboxyl terminus. In particular, H+Phe(H2O)4 exists as a single conformer in which all available hydrogen-bonding sites are occupied, completing the first hydration shell. Water molecules preferentially bind to a specific conformer of bare H+Phe, indicating hydration-induced conformational selection. These findings provide detailed insights into site-specific hydration and reveal the progressive conformational changes in H+Phe induced by sequential water attachment.
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