Antigenic variation is caused by long plasmid segment conversion in a hard tick-borne relapsing fever Borrelia

Tomohi Takeuchi1, Yasuhiro Gotoh2, Tetsuya Hayashi3

  • 1Department of Veterinary Medicine, Joint Graduate School of Veterinary Medicine, Yamaguchi University, Yamaguchi, Japan.

Plos Pathogens
|September 30, 2025
PubMed

Insights

Borrelia miyamotoi evades the immune system by replacing gene cassettes on its plasmids. This process involves replacing a long DNA segment, not just a single gene, enabling survival in hosts.

Area of Science:

  • Microbiology
  • Genetics
  • Immunology

Background:

  • Borrelia miyamotoi is a tick-borne spirochete causing emerging infectious diseases.
  • It exhibits antigenic variation via variable major protein (Vmp) gene switching, similar to relapsing fever Borrelia.
  • The mechanism of Vmp gene switching in B. miyamotoi was previously unknown.

Purpose of the Study:

  • To elucidate the mechanism of antigenic variation in Borrelia miyamotoi.
  • To identify the repertoire and arrangement of Vmp gene cassettes on B. miyamotoi linear plasmids.
  • To analyze Vmp gene switching in B. miyamotoi reisolated from infected mice.

Main Methods:

  • Whole genome sequencing of Japanese B. miyamotoi strains.
  • Analysis of Vmp gene cassette arrangement on five linear plasmids.
  • Characterization of B. miyamotoi clones from experimentally infected mice.

Main Results:

  • The Vmp gene switch in B. miyamotoi involves replacing the expression cassette and downstream silent cassettes with a long segment from an archival plasmid.
  • This long segment conversion (up to 16kb or more) results in the first cassette becoming the new expression cassette.
  • Segment conversion occurs early in infection (5 days post-infection), preceding antibody production, and is observed even in immunodeficient mice.

Conclusions:

  • Borrelia miyamotoi utilizes a novel mechanism of large-scale DNA segment replacement for antigenic variation.
  • This mechanism allows for immune evasion and persistence in mammalian hosts, independent of early host antibody response.
  • Findings provide crucial insights into bacterial survival strategies in hosts.

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