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Legume Pangenome Construction Using an Iterative Mapping and Assembly Approach
Tessa R MacNish1, Haifei Hu1,2, Yuxuan Yuan1
1School of Biological Sciences and Centre for Applied Bioinformatics, University of Western Australia, Perth, WA, Australia.
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A pangenome is a collection of genomic sequences found in the entire species rather than a single individual. It allows comprehensive, species-wide characterization of genetic variations and mining of variable genes that may play important roles in phenotypes of interest. Advances in DNA sequencing technologies have facilitated genome sequence assembly and have made pangenome constructions routine. Here, we present a reference genome-based iterative mapping and assembly method to construct a pangenome for a legume species.
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