Related Experiment Video
Updated: Jan 16, 2026

A Cell Culture Model for Producing High Titer Hepatitis E Virus Stocks
Published on: June 26, 2020
Human endogenous retrovirus ERVK3-1 characterizes a metabolically active and immunosuppressive subtype of liver
Xiaofen Wen1, Shulv Weng2, Minna Chen1
1Department of Medical Oncology, Cancer Hospital of Shantou University Medical College, Shantou, 515031, Guangdong, China.
Background:
Human endogenous retroviruses (HERVs), particularly the HERV-K family, are increasingly recognized for their roles in cancer biology, yet the function of ERVK3-1 (HERVK_3p21.31) in liver hepatocellular carcinoma (LIHC) remains largely unexplored.
Methods:
We analyzed transcriptomic data from the TCGA-LIHC cohort to identify differentially expressed genes (DEGs) between high and low ERVK3-1 expression groups, followed by functional enrichment analyses (GO, KEGG, GSEA), protein-protein interaction (PPI) network construction, and hub gene identification. The immunological relevance of ERVK3-1 was assessed through TIP immune cycle analysis, single-cell RNA sequencing datasets, and correlation with immune checkpoint expression. Immunotherapy responsiveness was evaluated using TIDE and TCIA databases.
Results:
High ERVK3-1 expression was associated with enrichment in metabolic and oxidative stress-related pathways, while low expression correlated with cell cycle and DNA replication. PPI analysis revealed mitosis-related hub genes (e.g., CCNB1, CDK1). ERVK3-1 expression promoted early immune cell recruitment but was inversely correlated with later stages of the cancer immunity cycle, including immune infiltration and T-cell killing. Single-cell data showed high ERVK3-1 expression in immunosuppressive subsets, alongside positive associations with inhibitory immune checkpoints (e.g., PD-1, CTLA-4, TIM-3). High ERVK3-1 expression also correlated with greater immune evasion and reduced immunotherapy responsiveness.
Conclusions:
ERVK3-1 plays a multifaceted role in LIHC progression, contributing to metabolic reprogramming, immune suppression, and resistance to immunotherapy. These findings highlight ERVK3-1 as a potential prognostic biomarker and therapeutic target in liver cancer.
Insights
Human endogenous retroviruses (HERVs) like ERVK3-1 are linked to liver cancer progression, promoting immune suppression and immunotherapy resistance. Targeting ERVK3-1 may offer new therapeutic strategies for liver hepatocellular carcinoma (LIHC).
Area of Science:
- Oncology
- Virology
- Immunology
Background:
- Human endogenous retroviruses (HERVs) are implicated in cancer.
- The role of ERVK3-1 (HERVK_3p21.31) in liver hepatocellular carcinoma (LIHC) is largely unknown.
Purpose of the Study:
- Investigate the function of ERVK3-1 in LIHC.
- Determine ERVK3-1's impact on tumor progression, immune evasion, and immunotherapy response.
Main Methods:
- Analyzed TCGA-LIHC transcriptomic data for ERVK3-1 expression.
- Performed functional enrichment, PPI network, and immune analyses.
- Assessed immunotherapy responsiveness using TIDE and TCIA databases.
Main Results:
- High ERVK3-1 expression correlates with metabolic and oxidative stress pathways.
- ERVK3-1 promotes immune suppression and immune checkpoint expression (PD-1, CTLA-4, TIM-3).
- High ERVK3-1 expression is associated with reduced immunotherapy response and increased immune evasion.
Conclusions:
- ERVK3-1 contributes to LIHC progression via metabolic reprogramming and immune suppression.
- ERVK3-1 may serve as a prognostic biomarker and therapeutic target in liver cancer.
- ERVK3-1 influences tumor microenvironment and resistance to cancer treatments.
More Related Videos
13:19Microarray-based Identification of Individual HERV Loci Expression: Application to Biomarker Discovery in Prostate Cancer
Published on: November 2, 2013
19:02High-Efficiency Transduction of Liver Cancer Cells by Recombinant Adeno-Associated Virus Serotype 3 Vectors
Published on: March 22, 2011
Related Concept Videos
Rous Sarcoma Virus (RSV) and Cancer
RSV is a retrovirus that contains two copies of a plus-strand RNA genome. Its genome consists of four main open...
Mechanisms of Retrovirus-induced Cancers
Non-LTR Retrotransposons
Retroviruses
LTR Retrotransposons
The internal coding region of LTR retrotransposons and their mechanism of transposition closely resembles a...
Retrovirus Life Cycles