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Updated: Jan 16, 2026

Preparation of 3D Collagen Gels and Microchannels for the Study of 3D Interactions In Vivo
Published on: May 9, 2016
Protocol to culture cells on genipin-mixed collagen gels with different stiffnesses
Seiichiro Ishihara1, Hisashi Haga1
1Department of Advanced Transdisciplinary Sciences, Faculty of Advanced Life Science, Hokkaido University, N10-W8, Kita-ku, Sapporo 060-0810, Japan.
Abstract:
The stiffness of extracellular matrices is critical for cellular functions such as growth and differentiation. Here, we present a protocol for culturing cells on stiffness-modulated collagen gels by adding genipin, an amine crosslinker with low cytotoxicity. We describe the steps for preparing collagen gels with genipin, culturing the cells, and immunofluorescent staining of the cells on the gels. This protocol has potential applications in the analysis of function or protein/gene expression in cultured cells on extracellular matrices of different stiffnesses. For complete details on the use and execution of this protocol, please refer to Ishihara et al.1.
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