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Updated: May 13, 2026

Three-dimensional Optical-resolution Photoacoustic Microscopy
Published on: May 3, 2011
Deep learning-enhanced 3D real-time photoacoustic imaging using experimental ground truths obtained from fluctuation
Ivana Falco1, Godefroy Guillaume2, Maxime Henry3
1Université Grenoble Alpes, CNRS, LIPhy, Grenoble 38058, France.
Deep learning enhances 3D photoacoustic (PA) imaging by using experimental data to improve visibility and contrast. This approach shows potential for real-time, artifact-free 3D PA imaging in various applications.
Area of Science:
- Biomedical optics
- Medical imaging
- Artificial intelligence in medicine
Background:
- 3D photoacoustic (PA) imaging faces visibility artifacts due to transducer limitations and sparse arrays.
- PA fluctuation imaging (PAFI) improves visibility but sacrifices temporal resolution.
- Deep learning (DL) shows promise for PA image enhancement but requires experimental training data.
Purpose of the Study:
- To develop a DL-based method for enhancing 3D PA images using experimental data.
- To train a 3D ResU-Net network using single-shot 3D PA images and PAFI images.
- To evaluate the performance of the DL-PAFI network for real-time, artifact-free 3D PA imaging.
Main Methods:
- Created an experimental training dataset from chicken embryo vasculature using single-shot 3D PA and PAFI images.
- Trained a 3D ResU-Net neural network on the experimental dataset.
- Evaluated the network's performance on new experimental test images and demonstrated real-time rendering capabilities.
- Tested the network's ability to predict *in vivo* images in mice.
Main Results:
- The DL-PAFI network effectively improved visibility and contrast in 3D PA images.
- Output image resolution was lower than PAFI, but training with experimental data alone yielded good performance.
- Pre-training with simulated data further improved overall accuracy.
- Demonstrated feasibility of real-time rendering and preliminary *in vivo* predictions in mice.
Conclusions:
- DL-based enhancement using experimental data can significantly improve 3D PA imaging quality.
- The trained network shows potential for real-time, artifact-free 3D PA imaging with sparse arrays.
- The method is adaptable for various *in vivo* applications, including cross-species predictions.
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