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Published on: August 15, 2019
A de novo frameshift variant in the candidate RBM15 in a proband with congenital mirror movements
Frederike L Harms1, Fanny Kortüm1, Malik Alawi2
1Institute of Human Genetics, University Medical Center Hamburg-Eppendorf, 20246 Hamburg, Germany.
Abstract:
Congenital mirror movements (CMMs) are involuntary movements of one side of the body that mirror intentional movements of the opposite side. DCC, NTN1, RAD51, ARHGEF7, and DNAL4 have been associated with CMMs. Two-thirds of CMM-affected individuals remain without a genetic diagnosis, indicating that variants in additional genes need to be discovered. We report on a 27-year-old female with CMMs of the hands. Trio exome sequencing in the proband and healthy parents did not reveal a likely pathogenic variant in one of the CMM-associated genes but rather a de novo heterozygous frameshift variant c.523dup (p.Ser175Lysfs∗8) in the candidate RBM15. The variant results in only partial nonsense-mediated mRNA decay of RBM15 transcripts in the proband's lymphoblastoid cells. RBM15 encodes an RNA-binding protein involved in alternative splicing as well as other processes. Dcc alternative splicing generates Dcclong and Dccshort isoforms, which are important for commissural axon midline crossing. We tested whether Rbm15 regulates Dcc alternative splicing by using an in vitro minigene assay. Ectopic expression of Rbm15, similar to the splicing factors Nova1 and Nova2, promotes the production of Dcclong transcripts. The possible link between Rbm15 and Dcc supports a role for Rbm15 in CMMs.
Insights
Congenital mirror movements (CMMs) are involuntary mirrored movements. A de novo variant in RBM15 was identified in a patient with CMMs, suggesting RBM15
Area of Science:
- Genetics
- Neuroscience
- Molecular Biology
Background:
- Congenital mirror movements (CMMs) involve involuntary mirroring of movements between body sides.
- Existing genetic causes for CMMs leave many patients undiagnosed, highlighting the need for new gene discovery.
Purpose of the Study:
- To identify the genetic cause of CMMs in a 27-year-old female.
- To investigate the potential role of RBM15 in CMM pathogenesis and its connection to DCC alternative splicing.
Main Methods:
- Trio exome sequencing was performed on the patient and her parents.
- Functional assays, including lymphoblastoid cell line analysis and an in vitro minigene assay, were used to assess the variant's impact.
- RBM15's role in DCC alternative splicing was examined.
Main Results:
- A de novo heterozygous frameshift variant (c.523dup) in RBM15 was identified as a potential cause of CMMs.
- The RBM15 variant led to partial nonsense-mediated mRNA decay.
- In vitro studies demonstrated that RBM15 promotes the production of DCClong transcripts, similar to known splicing factors.
Conclusions:
- RBM15 is implicated as a novel candidate gene for congenital mirror movements.
- The findings suggest a functional link between RBM15, DCC alternative splicing, and CMMs, potentially involving commissural axon guidance.
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