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Published on: April 2, 2021
Associations of PEDF genetic polymorphisms with retinopathy of prematurity
Pei-Liang Wu1, Eugene Yu-Chuan Kang2, Xiao Chun Ling3
1Department of Medicine, National Taiwan University, Taipei, Taiwan.
Insights
Pigment epithelium-derived factor (PEDF) gene variations are linked to increased risk and severity of retinopathy of prematurity (ROP). Specific PEDF polymorphisms, rs11658342 and rs12603825, may predict ROP development and progression in infants.
Area of Science:
- Ophthalmology
- Genetics
- Neonatology
Background:
- Retinopathy of prematurity (ROP) is a significant cause of visual impairment in premature infants.
- The role of genetic factors, specifically pigment epithelium-derived factor (PEDF) polymorphisms, in ROP development and severity requires further investigation.
Purpose of the Study:
- To investigate the association between specific single nucleotide polymorphisms (SNPs) in the PEDF gene and the risk, severity, and susceptibility to retinopathy of prematurity (ROP).
Main Methods:
- A prospective cohort study involving 585 premature infants.
- Genomic DNA was extracted and analyzed for three high-frequency PEDF SNPs using polymerase chain reaction (PCR).
- Multivariate logistic regression and odds ratios (OR) were used to assess the association between PEDF genotypes and ROP risk and severity.
Main Results:
- 51% of infants developed ROP, categorized into type-2 (milder) and type-1 ROP.
- Polymorphic genotypes GA and the combination of GA/AA in rs11658342 were associated with increased risk of both type-2 and type-1 ROP.
- The AA genotype in rs12603825 was linked to a higher risk of developing type-1 ROP.
Conclusions:
- Specific PEDF polymorphisms, namely GA and AA genotypes in rs11658342 and rs12603825, are associated with an elevated risk and severity of retinopathy of prematurity.
- These identified PEDF genotypes may serve as potential prognostic biomarkers for predicting ROP risk and progression in premature infants.
Abstract:
The current study explores the association between pigment epithelium-derived factor (PEDF) polymorphisms and risk, severity, susceptibility, and treatment response of retinopathy of prematurity (ROP). The study is designed in a prospective cohort manner, where all participating patients were recruited from two hospital branches. Three single nucleotide polymorphisms (SNPs) of PEDF with the highest allele frequency were selected. The genomic data were extracted from the patient's blood and amplified using polymerase chain reaction (PCR). A multivariate logistic regression model assessed the association between PEDF polymorphisms and ROP risk. Risk evaluation for each polymorphism was performed using an adjusted odds ratio (OR). 51 % of the 585 recruited patients developed ROP, subdivided into groups of type-2 or milder ROP and type-1 ROP. The results showed that patients with polymorphic genotype GA and the combination of genotypes GA and AA in the polymorphism of rs11658342 were associated with a higher risk of developing both type-2 or milder ROP (aOR = 1.757, p = 0.037; OR = 1.370, p = 0.013) and type-1 ROP (OR = 1.950, p = 0.013; OR = 1.358, p = 0.017). Patients with the polymorphic AA genotype in the polymorphism of rs12603825 had a higher risk of type-1 ROP (OR = 2.740, p = 0.029). The results indicate that patients with GA and AA genotypes in rs11658342 and rs12603825 of the PEDF polymorphism may serve as prognostic factors for ROP risks and severity.
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