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Metabolic Profile Analysis of Zebrafish Embryos
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Morphokinetic parameter S2 predicts early embryo developmental potential and associated metabolic pathways.

Xuehua Chen1, Huanhua Chen2, Guiting Huang2

  • 1Guangxi University of Chinese Medicine, Nanning, Guangxi, 530200, China.

Journal of Assisted Reproduction and Genetics
|October 13, 2025
PubMed
Summary

The S2 morphokinetic parameter, measuring early embryo cell division timing, moderately predicts blastocyst formation and quality. Its optimal cutoff of 0.7 hours aids in evaluating embryo developmental potential.

Keywords:
Embryo culture mediumEmbryo development potentialMetabolomicsMorphokineticTime-lapse imaging

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Area of Science:

  • Reproductive Medicine
  • Embryology
  • Metabolomics

Background:

  • Assessing early embryo developmental potential is crucial for successful IVF outcomes.
  • Morphokinetic parameters derived from time-lapse imaging offer insights into embryo development.
  • The S2 parameter, representing the 3-cell to 4-cell cleavage duration, warrants further investigation for its predictive value.

Purpose of the Study:

  • To determine the predictive value of the S2 morphokinetic parameter for early embryo developmental potential.
  • To establish an optimal cutoff value for the S2 parameter.
  • To explore metabolic pathways associated with S2 values and embryo development.

Main Methods:

  • Prospective analysis of 662 embryos from 65 patients using time-lapse incubators.
  • Receiver operating characteristic (ROC) analysis to determine the optimal S2 cutoff for predicting blastocyst formation and quality.
  • Metabolomic profiling of spent culture media (SCM) using liquid chromatography-tandem mass spectrometry (LC-MS) stratified by S2 cutoff.

Main Results:

  • The S2 parameter demonstrated moderate predictive capacity for blastocyst formation (AUC=0.622) and quality (AUC=0.645).
  • An optimal S2 cutoff of 0.7 hours was identified, with significant differences observed between blastocyst formation/quality groups.
  • Metabolomic analysis revealed 98 differentially expressed metabolites linked to protein digestion, aminoacyl-tRNA biosynthesis, and fatty acid metabolism.

Conclusions:

  • The S2 parameter (cutoff 0.7 h) exhibits moderate predictive value for embryo developmental potential.
  • Specific metabolic pathways are associated with S2 regulation, highlighting a link between morphokinetics and metabolism.
  • The S2 parameter holds potential for integration into multifactorial embryo evaluation models.