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Multiplexed Immunofluorescence Analysis and Quantification of Intratumoral PD-1+ Tim-3+ CD8+ T Cells
Published on: February 8, 2018
Elevated co-expression of TIMM17A and NMT1 is associated with poor survival in non-small cell lung cancer
Alfred A Chan1, Kamya Sankar2, Karen L Reckamp2
1The Lundquist Institute for Biomedical Innovation at Harbor-UCLA Medical Center, 1124 West Carson Street, Torrance, CA, 90502, USA.
Abstract:
Lung carcinoma cells harboring mutations in STK11 and/or KEAP1 in a KRAS mutant background have intrinsic therapeutic resistance. We found that these cells are sensitive to preclinical stage pharmacological inhibitors of N-myristoyltransferases, which reduce tumor growth in xenograft mouse models. Unexpectedly, the sensitivity to NMT inhibitors correlates with cell's dependency on the inner mitochondrial protein Translocase of Inner Mitochondrial Membrane 17 A (Protein: TIM17A, Gene: TIMM17A). Leveraging data from The Cancer Genome Atlas (TCGA), we set to further explore the significance of N-myristoyltransferase-1 (NMT1) and TIMM17A expression individually and together in cox-regression models to test their association to clinical endpoints in lung carcinoma. Our results showed that lung adenocarcinoma (LUAD) tissue with high expression of both NMT1 and TIMM17A had worse overall survival (OS), disease-specific survival (DSS), and disease-free survival (DFS) compared to those with low expression of both genes. Moreover, high NMT1 was associated with worse OS, but only in the group with also high TIMM17A. This highlights a novel NMT1/TIMM17A axis as a promising pathway for predicting patient prognosis. Further studies are warranted investigating both genes as targets for novel therapeutic strategies for KRAS mutant non-small cell lung carcinoma with STK11 and/or KEAP1 co-mutations.
Insights
Lung cancer with STK11/KEAP1 mutations shows resistance to KRAS-targeted therapies. N-myristoyltransferase inhibitors show promise by targeting TIMM17A, offering new therapeutic strategies.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Lung carcinoma with KRAS mutations and co-occurring STK11/KEAP1 mutations exhibits intrinsic therapeutic resistance.
- N-myristoyltransferase (NMT) inhibitors demonstrate preclinical efficacy in reducing tumor growth in xenograft models.
Purpose of the Study:
- To investigate the role of NMT1 and TIMM17A in KRAS-mutant lung cancer.
- To explore the association between NMT1 and TIMM17A expression and clinical outcomes in lung adenocarcinoma (LUAD).
Main Methods:
- Utilized The Cancer Genome Atlas (TCGA) data for analysis.
- Employed Cox-regression models to assess the relationship between gene expression and survival endpoints (OS, DSS, DFS).
Main Results:
- High co-expression of NMT1 and TIMM17A in LUAD tissues correlated with significantly worse overall survival (OS), disease-specific survival (DSS), and disease-free survival (DFS).
- Elevated NMT1 expression was associated with poorer OS, specifically in tumors with high TIMM17A expression.
Conclusions:
- A novel NMT1/TIMM17A axis is identified as a potential prognostic biomarker in lung carcinoma.
- This axis represents a promising therapeutic target for KRAS-mutant non-small cell lung cancer (NSCLC) with STK11/KEAP1 co-mutations.
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