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A High Throughput MHC II Binding Assay for Quantitative Analysis of Peptide Epitopes
Published on: March 25, 2014
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MHC II MAPPs for High-Confident Immunogenicity Risk Assessment of Biotherapeutics
Elise Pepermans1, Zuben E Sauna2, Sofie Pattyn3
1ImmuneSpec, Niel, Belgium. Elise.Pepermans@ImmuneSpec.com.
Methods in Molecular Biology (Clifton, N.J.)
|October 14, 2025
Summary
Immunogenicity risk assessments are crucial for biotherapeutics. A new MHC II MAPPs assay protocol identifies specific peptides presented by HLA class II, improving drug safety and efficacy evaluations.
Area of Science:
- Biopharmaceutical development
- Immunology
- Proteomics
Background:
- Biotherapeutics can elicit immunogenicity, impacting drug safety and efficacy.
- Assessing immunogenicity involves understanding protein processing by antigen-presenting cells (APCs) and peptide presentation via MHC class II (HLA class II).
- Current methods may not fully capture the in vivo processing and presentation landscape.
Purpose of the Study:
- To describe a robust protocol for MHC II-associated peptide proteomics (MAPPs) assay.
- To enable identification of therapeutic protein-derived peptides presented by individual MHC II variants.
- To enhance immunogenicity risk assessment for biotherapeutics.
Main Methods:
- Development and validation of a highly robust protocol for MHC II MAPPs.
- Utilizing MAPPs to analyze peptides derived from therapeutic proteins.
- Characterizing peptide-MHC II complexes relevant to immune responses.
Main Results:
- The described protocol provides a reliable method for MHC II MAPPs.
- The assay identifies specific peptides from therapeutic proteins bound to MHC II molecules.
- This offers insights into the processing and presentation steps relevant to immunogenicity.
Conclusions:
- The robust MHC II MAPPs protocol is a valuable tool for biopharmaceutical development.
- This assay aids in predicting and understanding T cell responses to biotherapeutics.
- Improved immunogenicity assessment contributes to safer and more effective drug development.
Keywords:
Antigen presentationBiotherapeutic developmentImmunogenicityMAPPsMHC IIMHC-associated peptide proteomicsRisk assessmentT cell epitopeUnwanted immunogenicityMore Related Videos
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