Explainable machine learning algorithm predicting working memory performance in Parkinson's disease using task-fMRI
Eiji Yasuda1, Takaaki Hattori2,3, Kaoru Shimano1
1Department of Neurology and Neurological Science, Institute of Science Tokyo, Bunkyo-Ku, Tokyo, Japan.
Journal of Neurology
|October 14, 2025
Summary
Researchers developed an explainable deep learning model to classify working memory (WM) performance in Parkinson's disease (PD) using task-based fMRI. The model achieved 93.3% accuracy, outperforming radiologists and identifying key brain regions involved in WM.
Area of Science:
- Neuroimaging
- Machine Learning
- Cognitive Neuroscience
Background:
- Parkinson's disease (PD) impairs motor and cognitive functions, especially working memory (WM).
- Task-based functional magnetic resonance imaging (fMRI) shows potential for decoding brain activity but has limited application in PD.
- Developing advanced analytical tools is crucial for understanding PD's impact on cognitive functions.
Purpose of the Study:
- To develop an explainable machine learning model for classifying WM performance levels in PD patients.
- To utilize task-based fMRI data for objective assessment of cognitive function in PD.
- To enhance the interpretability of neuroimaging findings in Parkinson's disease research.
Main Methods:
- 45 PD patients and 15 healthy controls (HCs) underwent task-based fMRI during an n-back WM task.
- PD patients were stratified into better, intermediate, and worse WM performance subgroups based on 3-back task results.
- A 3D convolutional neural network (3D-CNN) model, pre-trained with a 3D autoencoder, was employed for binary classifications.
Main Results:
- The 3D-CNN model achieved 93.3% accuracy in distinguishing PD patients with worse WM from HCs.
- This accuracy significantly surpassed the mean accuracy of expert radiologists (70.0%).
- Saliency maps highlighted the dorsolateral prefrontal cortex and parietal lobules as critical regions for WM performance, consistent with fMRI data.
Conclusions:
- An explainable deep learning model was successfully developed to classify WM performance in PD using task-based fMRI.
- This approach offers an objective and interpretable method for assessing brain function in clinical neuroimaging.
- The findings suggest potential for improved diagnostic and prognostic tools in Parkinson's disease management.


