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Updated: Jan 15, 2026

In vitro Organoid Culture of Primary Mouse Colon Tumors
Published on: May 17, 2013
STAG2 mutations in the normal colon induce upregulation of oncogenic pathways in neighbouring wildtype cells
Wei Ni Yew1, Christopher James Dean2, Dedrick Kok Hong Chan1,3,4
1Department of Surgery, Yong Loo Lin School of Medicine, National University of Singapore, Singapore, Singapore.
Abstract:
While driver mutations in the normal colon have been described, characterizing the role and function of these driver mutations in relation to colorectal oncogenesis remains incomplete. Here, we investigated the role of STAG2 mutants in the normal colon using patient-derived wildtype organoids. Using CRISPR-Cas9 gene editing, we generated STAG2 mutants, and co-cultured these mutants with wildtype organoids, mimicking the presence of such STAG2 mutants in the normal colon. We sought to determine the transcriptional impact of co-culture using scRNAseq. Surprisingly, we uncovered a possible cell-cell interaction between STAG2 mutants and wildtype organoids, in which wildtype organoids in co-culture with STAG2 mutants upregulated known oncogenic pathways. This included the upregulation of TNFα-signaling, as well as KRAS-signaling in wildtype organoids. These results suggested that STAG2 mutant cells exert a pro-oncogenic effect in a cell interactive manner, instead of via a cell autonomous approach. In conclusion, our findings demonstrate a novel mechanism of colorectal oncogenesis which can support further investigation.
Insights
STAG2 mutations in normal colon cells can promote colorectal cancer by influencing nearby healthy cells. This study reveals a novel cell-interactive mechanism driving oncogenesis.
Area of Science:
- Oncology
- Molecular Biology
- Genetics
Background:
- Driver mutations in normal colon cells are implicated in colorectal cancer.
- The precise role and function of these mutations in oncogenesis require further elucidation.
Purpose of the Study:
- To investigate the role of STAG2 mutants in the normal colon.
- To determine the transcriptional impact of STAG2 mutations on wildtype colon organoids.
Main Methods:
- Utilized patient-derived wildtype colon organoids.
- Employed CRISPR-Cas9 gene editing to generate STAG2 mutants.
- Performed co-culture experiments and single-cell RNA sequencing (scRNAseq) to analyze transcriptional changes.
Main Results:
- Wildtype organoids co-cultured with STAG2 mutants showed upregulation of oncogenic pathways.
- Specifically, TNFα-signaling and KRAS-signaling pathways were activated in wildtype organoids.
- STAG2 mutant cells demonstrated a pro-oncogenic effect through cell-cell interaction, not cell-autonomous action.
Conclusions:
- STAG2 mutant cells can promote colorectal oncogenesis via paracrine signaling to neighboring wildtype cells.
- This study identifies a novel mechanism of colorectal cancer development involving intercellular communication.
- Findings suggest STAG2 mutations play a critical role in early-stage colorectal tumorigenesis.
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