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Updated: Jan 15, 2026

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Induction and Clinical Scoring of Chronic-Relapsing Experimental Autoimmune Encephalomyelitis
Published on: July 4, 2007
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Clinical Features, Antibody Profiles, and Prognostic Factors in Autoimmune Encephalitis: A Single-Center Study
Bedriye Karaman1, Gülcan Neşem Baskan2, Merve Yavuz1
1Neurology Department, Faculty of Medicine, Ege University, Izmir 35100, Turkey.
Journal of Clinical Medicine
|October 16, 2025
Summary
Autoimmune encephalitis (AIE) with anti-SOX1 antibodies indicates a poor prognosis, strongly linked to malignancy and mortality. Limbic encephalitis (LE) presentation, however, predicts a better treatment response in AIE patients.
Area of Science:
- Neurology
- Immunology
- Oncology
Background:
- Autoimmune encephalitis (AIE) is a complex inflammatory central nervous system (CNS) disorder with diverse clinical and serological presentations.
- Identifying prognostic factors is crucial for effective management of AIE patients.
Purpose of the Study:
- To retrospectively identify poor prognostic factors in autoimmune encephalitis (AIE).
- To evaluate the association between antibody profiles, clinical features, malignancy, and treatment outcomes in AIE.
Main Methods:
- Retrospective analysis of 44 patients diagnosed with AIE between 2014 and 2024.
- Data collected included demographic, clinical, radiological, and serological findings.
- Patients were categorized by antibody localization and treatment response; poor prognosis defined as lack of improvement or death.
Main Results:
- Anti-SOX1 positivity was significantly associated with malignancy (OR=27.5, p=0.007) and mortality (OR=13.2, p=0.009).
- Limbic encephalitis (LE) presentation correlated with better treatment response (OR=14.0, p=0.019).
- Overall mortality was 20.1%, highest in anti-SOX1 positive patients (66.7%).
Conclusions:
- Anti-SOX1 antibody positivity is a critical indicator of poor prognosis in AIE, linked to increased malignancy and mortality risk.
- Limbic encephalitis presentation is associated with favorable treatment outcomes.
- Integrated assessment of antibody profile, clinical presentation, and malignancy screening is vital for AIE risk stratification and management.

