N-terminal half of MED14 is critical for Mediator-RNA polymerase II interaction and the resulting transcription
Yasemin Baris1, Javaid Jabbar2, Yasemin Yozgat3
1Department of Molecular Biology and Genetics, Bilkent University, Ankara, Turkey; Department of Physics and Kavli Institute of Nanoscience Discovery, University of Oxford, Oxford, United Kingdom.
Abstract:
Mediator is a large and evolutionarily conserved coactivator complex essential for RNA polymerase II (Pol II)-mediated gene regulation at multiple steps of the transcription process, including preinitiation complex assembly and function. Here, we used the MultiBac baculovirus expression system to generate recombinant human core Mediator subcomplexes and subsequent biochemical approaches to dissect the mechanism by which Mediator facilitates recruitment of Pol II to core promoters. Our results highlight a pivotal role in this process for the N-terminal half of the MED14 (MED14-NTD) subunit. We show that a reconstituted 15-subunit human core Mediator complex that contains only the MED14- NTD is fully functional in facilitating both basal and activated (p53) transcription. This complex directly interacts with the RPB1 subunit of Pol II and is required for recruiting Pol II to core promoters. LC-MS/MS analysis of Mediator-bound RPB1 indicates that the CTD is predominantly hypophosphorylated (≤1% detectable Ser5-P), consistent with recruitment-stage engagement. Moreover, recombinant RPB1 can completely reverse the human core Mediator-Pol II interaction. Notably, the human MED14-NTD region has secondary structure conservation with Schizosaccharomyces pombe. In addition, reanalysis of published cryo-EM structures of yeast Mediator-Pol II complexes strongly supports our conclusion. Thus, our analyses provide critical new insights into how Mediator binds to Pol II and recruits it to the promoters to facilitate transcription.
Insights
The Mediator complex, crucial for gene regulation, recruits RNA polymerase II (Pol II) to promoters. The MED14-NTD subunit is key, directly interacting with Pol II to facilitate transcription initiation.
Area of Science:
- Molecular Biology
- Gene Regulation
- Biochemistry
Background:
- Mediator is an essential coactivator complex for RNA polymerase II (Pol II)-mediated transcription.
- It plays a critical role in multiple steps of gene regulation, including preinitiation complex assembly.
- Understanding Mediator's mechanism in recruiting Pol II to promoters is vital for deciphering transcription regulation.
Purpose of the Study:
- To dissect the mechanism by which the Mediator complex facilitates the recruitment of Pol II to core promoters.
- To identify specific Mediator subunits involved in Pol II recruitment and interaction.
- To elucidate the role of the MED14 subunit in Mediator-Pol II interactions during transcription initiation.
Main Methods:
- Utilized the MultiBac baculovirus expression system to generate recombinant human core Mediator subcomplexes.
- Employed biochemical approaches, including LC-MS/MS analysis, to study Mediator-Pol II interactions.
- Reconstituted a 15-subunit human core Mediator complex containing the MED14 N-terminal domain (MED14-NTD).
Main Results:
- The MED14-NTD subunit plays a pivotal role in recruiting Pol II to core promoters.
- A reconstituted Mediator complex with MED14-NTD is fully functional in basal and activated transcription.
- Mediator directly interacts with the hypophosphorylated RPB1 subunit of Pol II, indicating recruitment-stage engagement.
Conclusions:
- The MED14-NTD is essential for Mediator's function in binding and recruiting Pol II to promoters.
- This interaction is crucial for facilitating transcription initiation.
- Findings provide critical insights into the mechanism of Mediator-Pol II interaction in transcription.
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