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Controlling Cross-Pollination of Biosensing Probes in Nanoscale Multiplexed Arrays
Hashem Hassan Nasralla1, Alexander James Wright1,2, Rahul Deshmukh1,2
1Department of Chemical and Biomolecular Engineering, Tandon School of Engineering, New York University, Brooklyn, NY, 11201, USA.
Small Methods
|October 24, 2025
Summary
This study minimized molecular cross-pollination in nanoscale biosensing arrays. Optimized thermal scanning probe lithography (tSPL) and incubation protocols achieved zero cross-contamination, enhancing biosensor accuracy.
Area of Science:
- Nanotechnology
- Biotechnology
- Surface Chemistry
Background:
- Multiplexed biosensing platforms demand precise probe immobilization at the nanoscale.
- Unwanted molecular transfer (cross-pollination) between probe patterns is a major challenge, reducing measurement accuracy.
Purpose of the Study:
- To investigate and mitigate cross-pollination in multiplexed biosensing arrays fabricated using thermal scanning probe lithography (tSPL).
- To establish a framework for reliable nanoscale patterning of multiple biomolecular probes, improving biosensor specificity and sensitivity.
Main Methods:
- Utilized thermal scanning probe lithography (tSPL) for sub-10 nm spatial resolution patterning.
- Systematically optimized tSPL parameters and chemical functionalization protocols, focusing on biomolecule incubation times.
Main Results:
- Demonstrated the ability to reduce cross-pollination to undetectable levels (0%) through optimized processing conditions.
- Established a clear relationship between processing parameters and cross-contamination rates.
Conclusions:
- Developed a practical framework for achieving reliable nanoscale patterning of multiple biomolecular probes on a single surface.
- Enabled the creation of high-fidelity, multi-target biosensing platforms with enhanced specificity and sensitivity for various applications.

