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Updated: Jan 6, 2026

Individualized Reconstitution of Human Milk Microbiota: A Feasible Approach in Real-World Settings
Published on: February 7, 2025
Infant formula milk shows microbiological contaminants that are not removed using recommended preparation methods
Siân Cairns1, Deirdre Gilpin2, Simon J S Cameron1
1School of Biological Sciences, Institute for Global Food Security, Queen's University Belfast, Belfast, BT9 5DL, United Kingdom.
Aims:
Understanding the microbiota of powdered infant formula (PIF) products may provide important insights that are not seen with currently mandated microbiological testing. This work aimed to identify the load and taxonomy of microorganisms which persist through recommended preparation methods and increasingly popular at-home preparation machines (APHM).
Methods And Results:
PIFs were purchased from commercial suppliers to cover the majority of available brands and products in the UK. PIF was prepared using either advised sterile 70°C water, sterile room temperature water, or a popular AHPM. Preparations were plated onto Tryptic soy agar and Sabourhaud dextrose agar. Total aerobic counts were taken and isolates identified via MALDI-ToF mass spectrometry. Overall microbial populations were significantly different due to preparation method and bacterial populations were significantly different between PIFs (P < 0.05). Four PIFs showed within product significant differences caused by the preparation method. No significant difference occurred in microbe levels amongst brands and product types. AHPM prepared milks had unique microbial recoveries. Potential pathogens were isolated including Bacillus cereus resistant to imipenem and meropenem. B. cereus showed temperature resistance above the WHO recommended temperature of 70°C.
Conclusions:
Current preparation guidance may not remove all microbial contaminants of PIFs, including the opportunistic pathogens identified in this work. These appear to be primarily environmental contaminants, and which may present a currently underappreciated concern with regards to infant microbiome development.
Insights
Microbial analysis of powdered infant formula (PIF) reveals that preparation methods, including at-home preparation machines (APHM), may not eliminate all contaminants. Some bacteria, like Bacillus cereus, can survive high temperatures, posing a potential risk to infant health.
Area of Science:
- Microbiology
- Infant Nutrition
- Food Safety
Background:
- Mandated microbiological testing for powdered infant formula (PIF) may not fully capture the microbial landscape.
- Understanding persistent microorganisms is crucial for infant health and microbiome development.
Purpose of the Study:
- To identify the microbial load and taxonomy persisting after PIF preparation using standard and at-home preparation machine (APHM) methods.
- To assess the effectiveness of recommended preparation temperatures against microbial contaminants.
Main Methods:
- PIF samples from UK commercial suppliers were prepared using sterile 70°C water, sterile room temperature water, or an APHM.
- Microbial analysis involved plating on Tryptic soy agar and Sabourhaud dextrose agar, total aerobic counts, and MALDI-ToF mass spectrometry for isolate identification.
Main Results:
- Microbial populations differed significantly based on preparation method, with APHM-prepared formulas showing unique microbial recoveries.
- Four PIFs exhibited significant microbial differences based on preparation method.
- Potential pathogens, including antibiotic-resistant Bacillus cereus, were isolated, with B. cereus demonstrating heat resistance above 70°C.
Conclusions:
- Current PIF preparation guidelines may not eliminate all microbial contaminants, including opportunistic pathogens.
- Identified pathogens appear to be environmental contaminants, representing an underappreciated concern for infant microbiome development.
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