Leveraging Centralized Health System Data Management and Large Language Model-Based Data Preprocessing to Identify
Fekede Asefa Kumsa1, Christopher L Brett2, Soheil Hashtarkhani1
1Center for Biomedical Informatics, Department of Pediatrics, College of Medicine, University of Tennessee Health Science Center, Memphis, TN.
JCO Clinical Cancer Informatics
|October 28, 2025
Summary
Identifying radiation therapy interruptions (RTI) is crucial for cancer care quality. Factors like cancer type, Medicaid coverage, and social vulnerability predict RTI, enabling targeted interventions.
Area of Science:
- Oncology
- Health Informatics
- Public Health
Background:
- Unplanned radiation therapy interruptions (RTI) compromise cancer treatment quality.
- Identifying risk factors for RTI is essential for improving patient outcomes.
Purpose of the Study:
- To evaluate the use of a centralized electronic health record warehouse and large language model (LLM) for data preprocessing.
- To facilitate the identification of risk factors associated with radiation therapy interruptions (RTI).
Main Methods:
- Analysis of demographic, behavioral, clinical, and neighborhood data for 2,130 radiotherapy patients.
- Measurement of treatment interruptions as missed days, adjusted for weekends/holidays.
- Multinomial logistic regression to identify factors associated with moderate (2-4 days) and severe (≥5 days) RTI.
Main Results:
- Moderate RTI (15.8%) linked to genitourinary/prostate cancer and Medicaid coverage.
- Severe RTI (7.7%) associated with marital status, head/neck/gynecologic cancers, Medicaid, radiation dose, and neighborhood social vulnerability.
- LLM-based preprocessing enabled efficient identification of these associations.
Conclusions:
- Automated data preprocessing effectively identified key factors associated with RTI.
- Marital status, disease site, Medicaid coverage, and social vulnerability are significant predictors of RTI.
- Data-driven risk assessment and intervention strategies are needed to maintain cancer treatment quality.


