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Biodiversity and spatial distribution of potentially ciguatera-causing dinoflagellates using DNA metabarcoding
Rosa Trobajo1, Javier Pérez-Burillo1, Sandra Gimeno-Monforte1
1Marine and Continental Waters Programme, IRTA-Institute for Food and Agricultural Research and Technology, Ctra de Poble Nou Km 5.5, La Ràpita, Tarragona, E43540, Spain.
DNA metabarcoding effectively identified potentially toxic Gambierdiscus and Fukuyoa species in the Canary and Balearic Islands. This method aids in detecting harmful algae, even at low densities, crucial for monitoring ciguatera poisoning risks.
Area of Science:
- Marine biology
- Microbiology
- Food safety
Background:
- Ciguatera poisoning (CP) is a foodborne illness caused by ciguatoxins from Gambierdiscus and Fukuyoa dinoflagellates.
- CP is expanding beyond tropical regions, with increasing reports in the Canary Islands and presence of potentially toxic species in the Balearic Islands.
- Accurate identification of these species is vital due to varying toxin levels and their low-density presence.
Purpose of the Study:
- To assess the utility of DNA metabarcoding targeting the D1-D2 LSU rDNA region for detecting Gambierdiscus and Fukuyoa species.
- To survey the microeukaryotic communities, including potentially harmful dinoflagellates, in the Canary and Balearic Islands.
- To identify problematic Gambierdiscus and Fukuyoa species in these regions.
Main Methods:
- DNA metabarcoding using the D1-D2 LSU rDNA region.
- Analysis of benthic microeukaryotic communities in the Canary and Balearic Islands.
- Identification and quantification of Gambierdiscus and Fukuyoa species and other dinoflagellates.
Main Results:
- DNA metabarcoding successfully detected Gambierdiscus and Fukuyoa species in both archipelagos.
- Predominant species identified were G. australes in the Balearics and G. excentricus and G. silvae in Gran Canaria.
- New records include F. ruetzleri in the Canaries and G. carolinianus in the Balearics, alongside a potential new Gambierdiscus species ('occultus').
Conclusions:
- LSU rDNA-based metabarcoding is a powerful tool for studying benthic microeukaryotic communities, including harmful dinoflagellates.
- The study highlights the presence and distribution of potentially ciguatoxin-producing species in the Canary and Balearic Islands.
- This method aids in early detection and monitoring of species linked to ciguatera poisoning.
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