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Published on: July 22, 2025
Integrated machine learning survival framework for consensus modeling in a large multicenter cohort of NSCLC
Xiao Wu1, Yang Lu2, Yongping Li3
1The First Affiliated Hospital of Bengbu Medical University, Bengbu, China.
Abstract:
Patients with advanced non-small cell lung cancer (NSCLC) harboring epidermal growth factor receptor (EGFR) mutations often benefit from third-generation tyrosine kinase inhibitors (TKIs), such as aumolertinib (AUM). However, the development of drug resistance significantly limits the clinical efficacy of AUM. To address this, we established an in vitro model of AUM-resistant cell lines and performed RNA sequencing to identify resistance-associated differentially expressed genes. Using machine learning, we constructed an AUM resistance-related prognostic signature (ARRPS). Our results demonstrated that ARRPS effectively predicts the prognostic risk of patients. Notably, for patients with high ARRPS scores, the addition of CD-437 or TPCA-1 to conventional AUM treatment may help overcome drug resistance. These findings suggest that ARRPS serves as both a prognostic tool and a guide for personalized treatment strategies, potentially optimizing the clinical management of NSCLC patients.
Insights
A new prognostic signature (ARRPS) predicts outcomes in non-small cell lung cancer (NSCLC) patients treated with aumolertinib (AUM). ARRPS may guide personalized treatments to overcome drug resistance.
Area of Science:
- Oncology
- Genomics
- Pharmacology
Background:
- Advanced non-small cell lung cancer (NSCLC) with EGFR mutations often responds to third-generation tyrosine kinase inhibitors (TKIs) like aumolertinib (AUM).
- Acquired resistance to AUM limits its long-term clinical effectiveness in NSCLC patients.
Purpose of the Study:
- To identify genes associated with AUM resistance in NSCLC.
- To develop a machine learning-based prognostic signature for AUM resistance.
- To explore potential combination therapies for overcoming AUM resistance.
Main Methods:
- Established in vitro models of AUM-resistant NSCLC cell lines.
- Performed RNA sequencing to identify differentially expressed genes.
- Utilized machine learning to construct the AUM Resistance-Related Prognostic Signature (ARRPS).
Main Results:
- Identified key differentially expressed genes linked to AUM resistance.
- Developed ARRPS, demonstrating its efficacy in predicting patient prognostic risk.
- Found that combining AUM with CD-437 or TPCA-1 may overcome resistance in high-ARRPS score patients.
Conclusions:
- ARRPS is a valuable prognostic tool for NSCLC patients undergoing AUM treatment.
- ARRPS can guide personalized therapeutic strategies to improve clinical outcomes.
- Targeted combination therapies show promise for overcoming AUM resistance in specific patient subgroups.
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