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Updated: Jan 13, 2026

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Determining the Likelihood of Variant Pathogenicity Using Amino Acid-level Signal-to-Noise Analysis of Genetic Variation
Published on: January 16, 2019
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Identifying Pathogenic Variants in Vietnamese Children with Functional Single Ventricle Based on Whole-Exome
Le Trong Tu1,2, Nguyen Thi Kim Lien3, Nguyen Van Tung3,4
1Department of Pediatrics, Hanoi Medical University, Hanoi 100000, Vietnam.
Diagnostics (Basel, Switzerland)
|October 29, 2025
Summary
This study identifies genetic variants in functional single ventricle (FSV) patients, revealing potential causes for this complex congenital heart disease. Findings guide future treatment and prevention strategies for FSV.
Area of Science:
- Genetics
- Cardiology
- Developmental Biology
Background:
- Functional single ventricle (FSV) is a complex congenital heart disease (CHD) with multifactorial etiology.
- Identifying specific pathogenic factors for FSV is challenging, hindering effective interventions and prevention.
Purpose of the Study:
- To identify genetic variants associated with functional single ventricle (FSV) using whole-exome sequencing.
- To understand the genetic underpinnings of FSV to inform treatment and prevention.
Main Methods:
- Whole-exome sequencing (WES) was conducted on 29 patients with functional single ventricle (FSV).
- Analysis focused on identifying heterozygous variants in CHD-associated genes.
Main Results:
- Ninety-five heterozygous variants across 48 CHD-associated genes were identified in FSV patients.
- Key genes with variants include AXIN1, BMP2, GATA4, MYH6, NOTCH1, and TBX genes, among others.
- Variants in COL6A1, CREBBP, MYBPC3, and MYH7 were associated with FSV phenotypes like septal defects and great artery transposition.
Conclusions:
- This is the first study to report genetic variants linked to functional single ventricle (FSV).
- The identified variants offer insights into the genetic causes of FSV.
- Findings can guide the development of targeted treatment and prevention strategies for FSV.

