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Comparing Manual and Automated Spatial Tracking of Captive Spider Monkeys Using Heatmaps
Silje Marquardsen Lund1,2, Frej Gammelgård1,2, Jonas Nielsen1,2
1Department of Chemistry and Bioscience, Aalborg University, Frederik Bajers Vej 7H, 9220 Aalborg, Denmark.
Animals : an Open Access Journal From MDPI
|October 29, 2025
Summary
Automated pose estimation using computer vision offers a reliable alternative to manual animal welfare observations. This technology accurately quantifies enclosure use and activity, improving zoo-based assessments.
Area of Science:
- Animal behavior and welfare science
- Computer vision applications in zoology
- Primate ethology
Background:
- Traditional animal welfare assessments rely on manual observation, which is labor-intensive, prone to bias, and limited in temporal scope.
- Quantifying enclosure use and activity is crucial for supporting naturalistic behaviors and enhancing animal Quality of Life (QoL).
Purpose of the Study:
- To compare the efficacy of manual tracking (ZooMonitor) with automated pose estimation (SLEAP) for monitoring animal behavior.
- To validate computer vision technology as a reliable tool for zoo-based welfare assessments.
Main Methods:
- Manual observation and automated pose estimation (SLEAP) were used to track enclosure use and activity in black-headed spider monkeys.
- Spatial heatmaps and activity estimates were generated and compared between the two methods.
- Data were collected over six non-consecutive days on a mother-son pair at Aalborg Zoo.
Main Results:
- Both manual tracking and automated pose estimation showed strong agreement in identifying core activity areas (83-99% overlap, Pearson's r = 0.93-1.00).
- Comparable estimates of active time were obtained, with no significant differences between methods across days (p = 0.952).
- Automated pose estimation demonstrated reliability and scalability for monitoring enclosure use and activity.
Conclusions:
- Computer vision technology, specifically automated pose estimation, provides a dependable and efficient method for animal welfare assessments in zoos.
- This technology reduces the need for time-consuming manual observations, improving consistency and scalability.
- Automated monitoring enhances the ability to support naturalistic behaviors and improve animal QoL.

