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Statistical Methods for Multi-Omics Analysis in Neurodevelopmental Disorders: From High Dimensionality to Mechanistic

Manuel Airoldi1, Veronica Remori1, Mauro Fasano1,2

  • 1Department of Science and High Technology, University of Insubria, 22100 Como, Italy.

Biomolecules
|October 29, 2025
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Summary
This summary is machine-generated.

Statistical methods for analyzing complex omics data are crucial for understanding neurodevelopmental disorders (NDDs). This review highlights how integrative multi-omics approaches reveal molecular signatures, advancing precision medicine for NDDs.

Keywords:
multi-omics integrationneurodevelopmental disordersstudy designwide data

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Area of Science:

  • Genetics
  • Neuroscience
  • Bioinformatics

Background:

  • Neurodevelopmental disorders (NDDs) like autism and ADHD are complex and affect millions globally.
  • High-throughput omics technologies provide insights into genetic and molecular underpinnings of NDDs.
  • Analyzing high-dimensional omics data presents significant statistical challenges.

Purpose of the Study:

  • To provide a comprehensive overview of statistical frameworks for analyzing high-dimensional omics datasets in NDDs.
  • To illustrate how these methods reveal convergent molecular signatures across different omics layers.
  • To discuss emerging strategies for advancing mechanistic understanding and precision medicine in NDDs.

Main Methods:

  • Review of statistical frameworks including univariate/multivariate models, penalized regression, sparse canonical correlation analysis, partial least squares.
  • Overview of integrative multi-omics methods like DIABLO, similarity network fusion, and MOFA.
  • Illustration of methods using transcriptomic, proteomic, and metabolomic data from human cohorts and experimental models.

Main Results:

  • Statistical approaches have identified convergent molecular signatures in NDDs, including synaptic, mitochondrial, and immune dysregulation.
  • These signatures are consistently observed across transcriptomic, proteomic, and metabolomic data layers.
  • Emerging strategies like single-cell omics and machine learning integration show promise.

Conclusions:

  • Integrative multi-omics analysis, supported by robust statistical methods, is essential for understanding NDD mechanisms.
  • These approaches can translate complex molecular patterns into valuable biomarkers and therapeutic targets.
  • The findings pave the way for advancing precision medicine in the field of neurodevelopmental disorders.