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Updated: Jan 13, 2026

Preparation of a Non-Cardiomyocyte Cell Suspension for Single-Cell RNA Sequencing from a Post-Myocardial Infarction Adult Mouse Heart
Published on: February 3, 2023
The long non-coding RNA Snhg15 protects the heart after myocardial infarction
Mariana Shumliakivska1, Ariane Fischer2, Marion Muhly-Reinholz2
1Institute of Cardiovascular Regeneration, Center of Molecular Medicine, Goethe University Frankfurt, Germany; German Center for Cardiovascular Research DZHK, Partner site Rhein/Main, Frankfurt am Main, Germany; Cardiopulmonary Institute, Goethe University Frankfurt, Germany.
Insights
Reduced expression of the small nucleolar RNA host gene 15 (Snhg15) long non-coding RNA (lncRNA) contributes to cardiomyocyte death in heart failure. Restoring Snhg15 levels may protect heart function after myocardial infarction.
Area of Science:
- Cardiology
- Molecular Biology
- Genetics
Background:
- Cardiomyocytes are terminally differentiated cells that do not divide.
- Loss of cardiomyocytes after myocardial infarction leads to fibrotic scarring and impaired cardiac function.
- Understanding cardiomyocyte death mechanisms is crucial for developing heart failure therapies.
Purpose of the Study:
- To investigate the molecular mechanisms governing cardiomyocyte death in heart failure.
- To identify key molecular players involved in heart failure-induced cell death.
- To explore the therapeutic potential of targeting specific molecules for cardiomyocyte protection.
Main Methods:
- Combined heart failure transcriptomics with in vitro cell assays.
- Conducted loss-of-function studies using HL-1 cardiomyocyte-like cells.
- Utilized adeno-associated virus delivery for in vivo gene therapy in a myocardial infarction model.
Main Results:
- Reduced gene expression of the long non-coding RNA (lncRNA) small nucleolar RNA host gene 15 (Snhg15) was identified as a hallmark of ischemic and dilated heart failure.
- Snhg15 depletion in HL-1 cells led to nucleolar disruption and cell death via a p53-dependent pathway.
- Adeno-associated virus-mediated delivery of Snhg15 prior to myocardial infarction partially preserved cardiac function in both acute and chronic phases.
Conclusions:
- Snhg15 acts as a critical regulator of cardiomyocyte cell death in the context of heart failure.
- The lncRNA Snhg15 shows potential as a therapeutic agent to mitigate cardiomyocyte loss.
- Targeting Snhg15 may offer a novel strategy for treating heart failure and improving cardiac outcomes.
Abstract:
Cardiomyocytes are postmitotic cells that do not proliferate in the heart. In order to maintain the structural integrity of the heart, cardiomyocyte loss due to cell death after myocardial infarction is compensated with a non-contractile fibrotic scar that compromises cardiac function. Here, we have combined heart failure transcriptomics with in vitro assays to determine the molecular mechanisms that govern cell death in heart failure. Our data identified the reduced gene expression of the long non-coding RNA (lncRNA) small nucleolar RNA host gene 15 (Snhg15) as a hallmark of ischemic and dilated heart failure. Furthermore, loss-of-function studies in HL-1-cardiomyocyte-like cells revealed that Snhg15 depletion induces nucleolar disruption and cell death in a p53-dependent mechanism. Finally, adeno-associated virus delivery of Snhg15 prior to a myocardial infarction partially protected cardiac function in the acute and chronic phases after myocardial infarction. In conclusion, our studies identify Snhg15 as a regulator of cardiomyocyte cell death in the context of heart failure and suggest that delivery of the lncRNA may represent a potential therapeutic tool to reduce cardiomyocyte death.
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