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Metal Meets Nucleobase: A Cd(II)-Adenine Complex with Bridging Supramolecular Architectures and Antibacterial
Sourav Nath1,2, Tanushree Sen3, Vishal Kumar Deb4
1Department of Chemistry and Vivekananda Centre for Research, Ramakrishna Mission Residential College, Narendrapur, Kolkata, 700103, India.
None:
A mononuclear Cd(II) complex, [Cd(9BuA)2(H2O)2(DMF)NO3]NO3 (1) derived from 9-butyladenine (9BuA) has been synthesized and characterized using elemental analysis, Fourier transform infrared 1H NMR, and single-crystal X-ray diffraction analysis. Crystallographic analysis reveals a distorted octahedral coordination environment around the Cd(II) center, where two 9BuA ligands, two water molecules, a DMF molecule, and a nitrate ion coordinate through N and O atoms. The complex exists as a monocation stabilized by an additional noncoordinated nitrate counterion. Hirshfeld surface analysis and electrostatic potential mapping highlight the dominance of hydrogen-bonding interactions (CH…O, NH…O, OH…O, etc.), which collectively stabilize the 3D crystal packing. Energy framework analysis identifies 18 dimeric interactions, with the most stable dimers stabilized by strong Coulombic forces, resulting in total interaction energies between -145.3 and -376.3 kJ mol-1. The photophysical investigation shows chelation-enhanced fluorescence due to ligand rigidification upon coordination. In vitro antibacterial assays of complex 1 against six bacterial strains-three Gram-positive (Mammaliicoccus lentus, Staphylococcus cohnii, Bacillus cereus) and three Gram-negative (Enterobacter cloacae, Klebsiella pneumoniae, Shigella sonnei)-reveal selective and potent activity. To the best of current knowledge, this study presents the first structurally and biologically characterized Cd(II) complex of a modified adenine derivative, integrating detailed supramolecular and photophysical analyses with antibacterial evaluation.
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