From conventional scores to explainable AI: a six-method comparative framework for failure prediction in percutaneous
Ferhat Çoban1,2, Hüseyin Kutlu3, Bedreddin Kalyenci4
1Faculty of Medicine, Department of Urology, Adıyaman University, Adıyaman, Turkey. coban_ferhat@hotmail.com.
World Journal of Urology
|November 2, 2025
Summary
A new machine learning model accurately predicts percutaneous nephrolithotomy failure, outperforming traditional methods. Explainable AI enhances risk stratification for kidney stone surgery.
Area of Science:
- Urology
- Medical Informatics
- Artificial Intelligence
Background:
- Percutaneous nephrolithotomy (PCNL) is standard for large kidney stones.
- Existing predictive models have limitations due to linear assumptions.
- Accurate prediction of PCNL failure is crucial for patient outcomes.
Purpose of the Study:
- Develop and validate a machine learning (ML) model with explainable AI (XAI) to predict PCNL failure.
- Compare the ML/XAI model's performance against traditional logistic regression and scoring systems.
- Improve pre-operative risk stratification for PCNL.
Main Methods:
- Retrospective analysis of 287 PCNL patients.
- Utilized demographic, laboratory, and imaging data.
- Employed multiple feature selection techniques and ML algorithms (Voting Classifier).
- Applied SHAP and LIME for model interpretability.
- Compared performance with logistic regression, GSS, and CROES scoring systems.
Main Results:
- The ML Voting Classifier achieved superior performance (AUC=0.839, accuracy=84.5%) compared to logistic regression (AUC=0.812) and scoring systems (AUC=0.615-0.653).
- Key predictors identified by SHAP analysis include stone-to-skin distance and stone length.
- Logistic regression identified multiple stones as a risk factor and stone-to-skin distance as protective.
Conclusions:
- The developed ML/XAI model offers higher accuracy and interpretability for predicting PCNL failure.
- This clinically applicable model enhances pre-operative risk stratification in urology.
- Further validation in multicenter prospective studies is recommended for generalizability.
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