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Microbiota Analysis Using Two-step PCR and Next-generation 16S rRNA Gene Sequencing
Published on: October 15, 2019
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Gut Pathogens and Cytokine Profiles in Autism: A Multi-Biosample Analysis
Israa Z Hamad1, Hanan Tariq Subhi2, Fatima Rammadan Abdul1
1Department of Biology, College of Science, Mustansiriyah University, Baghdad, Iraq.
Summary
Children with autism spectrum disorder (ASD) show elevated pro-inflammatory cytokines and gut microbial changes. Interleukin-6 (IL-6) and Tumor Necrosis Factor-alpha (TNF-α) show promise as potential biomarkers for early ASD diagnosis.
Area of Science:
- Immunology
- Microbiology
- Genetics
Background:
- Autism spectrum disorder (ASD) is a complex neurodevelopmental condition.
- Immune dysregulation and gut microbiome alterations are increasingly implicated in ASD pathogenesis.
- Identifying reliable biomarkers for ASD is crucial for early diagnosis and intervention.
Purpose of the Study:
- To investigate immune, microbial, and gene expression profiles in children with ASD.
- To evaluate the diagnostic potential of serum cytokines as biomarkers for ASD.
- To explore the relationship between microbial dysbiosis and immune alterations in ASD.
Main Methods:
- Serum cytokine levels (IL-1β, IL-6, IL-17A, TNF-α) were measured using ELISA in 20 children with ASD and 10 controls.
- Gene expression analysis was performed using RT-qPCR on blood and saliva samples.
- Stool samples were analyzed for bacterial composition using 16S rRNA sequencing.
- Receiver Operating Characteristic (ROC) curve analysis was used to assess diagnostic accuracy.
Main Results:
- Children with ASD exhibited significantly elevated serum levels of IL-1β, IL-6, IL-17A, and TNF-α compared to controls (p < 0.01).
- Serum cytokine levels were strongly intercorrelated, and ROC analysis indicated excellent diagnostic potential.
- Bacterial analysis revealed dysbiosis, with a predominance of Escherichia species in the stool of ASD patients.
- Gene expression patterns in blood mirrored serum cytokine levels, suggesting systemic immune involvement.
Conclusions:
- ASD in this Iraqi cohort is associated with significant pro-inflammatory immune signatures and gut microbial dysbiosis.
- Serum IL-6 and TNF-α demonstrate potential as valuable biomarkers for the early diagnosis of ASD.
- Further research is warranted to validate these findings and explore their utility in clinical settings for targeted interventions.
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