Chamber-specific transcriptomic insight into cardiac development using guinea pig and human heart tissue

Shatha Salameh1,2,3, Devon Guerrelli1,2,4, Luther M Swift1,2

  • 1Children's National Heart Center, Children's National Hospital, Washington, District of Columbia, United States.

Physiological Genomics
|November 6, 2025
PubMed

Insights

Guinea pig hearts show distinct gene expression changes during development, mirroring human heart maturation. This study identifies conserved markers, supporting guinea pigs as a preclinical model for pediatric cardiac research.

Area of Science:

  • Cardiovascular Research
  • Developmental Biology
  • Genomics

Background:

  • Human heart development involves complex molecular and functional changes, but understanding these dynamics is limited.
  • Pediatric cardiac research is hampered by a lack of suitable preclinical models.
  • Guinea pigs share similarities with humans in ion channel expression and drug response, suggesting their potential as a cardiac model.

Purpose of the Study:

  • To characterize transcriptional changes in guinea pig hearts during postnatal development (neonatal, juvenile, adult).
  • To compare gene expression patterns between atrial and ventricular tissues during maturation.
  • To identify conserved cardiac maturation markers between guinea pig and human atria.

Main Methods:

  • Transcriptional profiling of neonatal, juvenile, and adult guinea pig hearts.
  • Comparative analysis of gene expression in right atrial and left ventricular tissues.
  • Cross-species transcriptome comparison between human and guinea pig atria.

Main Results:

  • Neonatal guinea pig hearts showed overexpression of cell-cycle and energy metabolism genes, while adult hearts overexpressed calcium signaling genes.
  • Atrial maturation was linked to sinoatrial node and conduction pathways, whereas ventricular maturation involved sarcomere organization and action potential regulation.
  • Conserved maturation markers (S100A1, SLN, MYL4) were identified in guinea pig and human atria, indicating shared developmental programs.

Conclusions:

  • The guinea pig serves as a valuable preclinical model for studying human heart maturation due to conserved gene expression patterns.
  • This study provides a molecular framework for understanding age- and chamber-specific cardiac development.
  • Findings support the development of age-specific therapies and computational models for pediatric cardiovascular conditions.

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