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Updated: Jan 12, 2026

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Brain Infarct Segmentation and Registration on MRI or CT for Lesion-symptom Mapping
Published on: September 25, 2019
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Both Infarcted and Noninfarcted Brain Regions Contribute to Deep Learning-Based MRI Prediction of Acute Stroke
Yongkai Liu1, Bin Jiang2, Henk van Voorst2
1From the Department of Radiology (Y.L., B.J., H.v.V., H.F., Z.Z., S. Luo, M.E.M., J.J.H., G.Z.), Stanford University, Stanford, California yongkliu@stanford.edu.
AJNR. American Journal of Neuroradiology
|November 6, 2025
Summary
Deep learning models using full brain MRI scans accurately predict acute ischemic stroke (AIS) outcomes. Non-infarcted brain regions also provide crucial predictive information for stroke recovery.
Area of Science:
- Neuroimaging
- Artificial Intelligence
- Stroke Medicine
Background:
- Predicting long-term clinical outcomes after acute ischemic stroke (AIS) is crucial for patient care and research.
- Early information from brain imaging can inform these predictions.
Purpose of the Study:
- To investigate the contribution of different brain imaging regions, including non-infarcted areas, to predicting 90-day stroke outcomes using deep learning (DL).
- To assess the efficacy of DL models trained on various imaging inputs for stroke outcome prediction.
Main Methods:
- Developed and validated DL models on MRI DWI scans from 449 AIS patients (1-7 days post-stroke).
- Trained models on infarct volumes, full-brain images, infarct masks, intensity-preserved infarct masks, and lesion-neutralized images.
- Evaluated performance using accuracy, mean absolute error (MAE), and area under the curve (AUC) for predicting modified Rankin Scale (mRS) scores.
Main Results:
- The model using full-brain images achieved the lowest MAE (1.07) and highest AUC (0.86) for predicting unfavorable outcomes (mRS > 2).
- Models trained on infarct volume alone showed the highest MAE (1.51).
- Intermediate inputs (masks, lesion-neutralized images) improved predictions over volume alone but underperformed full-brain models.
Conclusions:
- Full brain imaging provides the most accurate predictions for 90-day stroke outcomes.
- Infarct characteristics and non-infarcted brain regions significantly contribute to outcome prediction.
- Non-infarcted areas may reflect brain health and resilience, offering valuable prognostic information.

