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Mei5-Sae3 stabilizes both active and inactive forms of Dmc1 filaments independently of its impact on ATP hydrolysis
Yuen-Ling Chan1, Diedre Reitz2,3, Brian Budke1
1Department of Radiation and Cellular Oncology, Department of Molecular Genetics and Cell Biology, University of Chicago, Chicago, IL 60637, United States.
Abstract:
In budding yeast, Dmc1's recombinogenic activity is controlled by the meiosis-specific heterodimer Mei5-Sae3. Mei5-Sae3 is required for assembly of Dmc1 at sites of meiotic DNA double-stranded breaks. Here, we report Mei5-Sae3 can stabilize Dmc1 filaments in both the active and inactive allosteric conformations depending on the nucleotide cofactor supporting filament formation. Mei5-Sae3 specifically stabilizes the active filament form without inhibiting ATP hydrolysis, in contrast to high concentrations of calcium, AMP-PNP, and the E157D mutation in Dmc1, each of which promotes Dmc1 filament stability by processes that include blocks to ATP hydrolysis. Mei5-Sae3 increases Dmc1 ATP hydrolysis by a mechanism that could be a cause of active filament stabilization or a secondary and inconsequential effect of active filament stabilization. Mei5-Sae3 can also stabilize filaments in the inactive conformation with ADP as a cofactor. These results show that Mei5-Sae3's filament stabilization activity does not fully depend on alteration of the hydrolytic cycle. We also show Dmc1-E157D, a gain-of-function protein that bypasses the requirement for Mei5-Sae3 in vivo, is defective in ATPase activity and stabilizes the active form of Dmc1 filaments as predicted by previous observations. Hence, Dmc1's homology search and strand exchange activities do not depend on its ability to hydrolyze ATP.
Insights
The meiosis-specific protein complex Mei5-Sae3 stabilizes the DNA repair protein Dmc1 filaments. This stabilization occurs in both active and inactive states without blocking ATP hydrolysis, revealing new insights into DNA repair mechanisms.
Area of Science:
- Molecular Biology
- Genetics
- Biochemistry
Background:
- Meiosis involves DNA recombination, crucial for genetic diversity.
- The protein Dmc1 plays a key role in homologous recombination during meiosis.
- Meiosis-specific protein complex Mei5-Sae3 regulates Dmc1 activity.
Purpose of the Study:
- To investigate how Mei5-Sae3 stabilizes Dmc1 filaments.
- To understand the role of nucleotide cofactors in Dmc1 filament formation and stability.
- To elucidate the relationship between Dmc1's ATPase activity and its recombinogenic functions.
Main Methods:
- In vitro biochemical assays to study Dmc1 filament formation and stabilization.
- Analysis of Dmc1's ATPase activity in the presence of Mei5-Sae3 and different nucleotide cofactors.
- Characterization of a gain-of-function Dmc1 mutant (Dmc1-E157D).
Main Results:
- Mei5-Sae3 stabilizes Dmc1 filaments in both active (ATP-bound) and inactive (ADP-bound) conformations.
- Unlike other stabilizers, Mei5-Sae3 does not inhibit ATP hydrolysis in active filaments.
- Mei5-Sae3 can increase Dmc1's ATP hydrolysis rate.
- The Dmc1-E157D mutant stabilizes active filaments but has defective ATPase activity.
Conclusions:
- Mei5-Sae3's filament stabilization mechanism is distinct and does not solely rely on altering the ATP hydrolysis cycle.
- Dmc1's DNA repair functions (homology search and strand exchange) are independent of its ATP hydrolysis activity.
- These findings provide a deeper understanding of the regulation of meiotic recombination.
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