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Published on: May 10, 2024
Improved early prediction of acute pancreatitis severity using SHAP-based XGBoost model: Beyond traditional scoring
Ana Cisnal1, María Lourdes Ruiz Rebollo2, César Flórez-Pardo2
1Institute of Advanced Production Technologies, School of Industrial Engineering, University of Valladolid, Paseo Prado de la Magdalena 3-5, 47011, Valladolid Spain.
Background:
Acute pancreatitis (AP) progresses to severe forms in about 20 % of cases, leading to high morbidity and mortality. Traditional clinical scoring systems for severity prediction (e.g., Ranson, BISAP), are limited by delayed applicability, and suboptimal diagnostic accuracy.
Aims:
To develop and validate machine learning (ML) models for early prediction of moderately severe and severe acute pancreatitis (MSAP-SAP), and to compare them with conventional scores.
Methods:
A retrospective cohort of 816 patients (2014-2023) was analyzed. ML models were developed using admission (24-hour) and early (48-hour) data. Models were trained and tested using an 80:20 stratified split and evaluated based on ROC-AUC. F-Anova, Mutual Information and SHapley Additive exPlanations (SHAP) were used for feature selection. SHAP was also used for model interpretability.
Results:
The XGBoost model with SHAP-based feature selection (XGBSH) achieved the highest predictive performance with ROC-AUCs of 0.89 (24-hour) and 0.94 (48-hour) on the test cohort. Key predictive features included SIRS, BUN, CRP, creatinine, and pleural effusion. Compared to Ranson and BISAP (both ROC-AUC = 0.72), the XGBSH models demonstrated superior accuracy and allowed flexible, threshold-based classification.
Conclusion:
The proposed SHAP-enhanced XGBoost model offers a reliable and interpretable tool for early prediction of AP severity, improving clinical decision-making and patient management.
Related Concept Videos
Acute Pancreatitis II: Clinical Manifestations and Management
Chronic Pancreatitis II: Collaborative Care
Assessment:
Acute Pancreatitis I: Introduction
Acute pancreatitis is characterized by rapid inflammation of the pancreas, often caused by factors like gallstone blockage or excessive alcohol consumption. Chronic pancreatitis, on the other hand, is a slow, progressive inflammation that may result from long-term alcohol abuse, obstructions in the pancreatic duct, or genetic factors.
The causes of acute pancreatitis include:

