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Measuring Interactions of Globular and Filamentous Proteins by Nuclear Magnetic Resonance Spectroscopy NMR and Microscale Thermophoresis MST
Published on: November 2, 2018
A modular library for fast prototyping of solution-state nuclear magnetic resonance experiments
Michał Górka1, Wiktor Koźmiński1
1Biological and Chemical Research Centre, Faculty of Chemistry, University of Warsaw, Żwirki i Wigury 101, 02-089 Warsaw, Poland.
Abstract:
We present a framework library (Modular Elements, ME) for the development of pulse sequences for Bruker spectrometers. It implements a two-level abstraction approach - the lower level comprises basic functional elements of pulse sequences and the higher one often-reused blocks comprising several evolution periods. The low-level abstractions reduce code duplication between variants of experiments such as hard-pulse and selective variants of individual NMR experiments. The high-level modules enable further reuse of pulse program code and aid in the construction of complex experiments. We show the library's functionality by presenting pulse programs that can be switched between standard and TROSY variants as well as hard and shaped pulses and that can seamlessly incorporate real-time homodecoupling. Adaptability is further demonstrated in a configurable 4D NOESY program.
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