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Skeletal muscle dysfunction in severe burns: identification of essential genes and drug discovery
Bai Hailiang1, Bai Xiafen2, Duan Hongjie3
1Research Center of Plastic Surgery Hospital, Chinese Academy of Medical Sciences and Peking Union Medical College, Beijing 100144, China.
Abstract:
Skeletal muscle dysfunction (SMD) is a common clinical feature among patients with severe burns and plays a crucial role in the recovery and prognosis of burn patients. However, the molecular targets and signal pathways of SMD after burns have not been fully understood, and there is an even greater lack of effective treatment measures. In this study, firstly, genes commonly related to SMD and functional recovery were obtained from the literature. Techniques included constructing protein-protein networks via the MCODE and cytoHubba plugins of Cytoscape, conducting GO analysis and KEGG analysis, and verifying the findings in animal models of severe burn-induced SMD by qRT-PCR. Subsequently, the key genes and signal pathways were determined by using GeneMANIA analysis. The transcription factors and ceRNA networks of the hub genes were identified, and the drug molecules that control the hub genes were obtained. Finally, molecular docking between gene targets and drug molecules was carried out, and the ADMET (absorption, distribution, metabolism, excretion, and toxicity) properties of the drug molecules were verified. We identified 15 hub genes, and qRT-PCR results showed that 14 genes had significant differences, including IL6, TNF, IGF1, STAT3, IL10, AGT, LEP, CCL2, SIRT1, CASP3, MAPK3, PPARG, ALB, and IRS1. By analyzing the internal relationships, it was found that the gene STAT3 and the JAK/STAT3 pathway are the molecular targets and signal pathways of SMD. The transcription factors, ceRNA networks, and drug molecules were also determined. In addition, after molecular docking and ADMET analysis, it was found that the drug fluticasone performed excellently in all aspects. In conclusion, STAT3 was identified as the key target and signal pathway for functional recovery after SMD in burn patients.
Insights
Skeletal muscle dysfunction in burn patients is linked to STAT3 and the JAK/STAT3 pathway. Fluticasone shows promise as a treatment targeting these pathways for improved recovery.
Area of Science:
- Biomedical research
- Molecular biology
- Burn injury research
Background:
- Skeletal muscle dysfunction (SMD) is prevalent in severe burn patients, impacting recovery and prognosis.
- Molecular mechanisms and effective treatments for burn-induced SMD remain poorly understood.
Purpose of the Study:
- To identify key molecular targets and signaling pathways involved in skeletal muscle dysfunction after severe burns.
- To explore potential therapeutic strategies for improving functional recovery in burn patients.
Main Methods:
- Literature review for SMD-related genes, protein-protein network construction (Cytoscape), Gene Ontology (GO) and KEGG pathway analysis.
- Validation in burn-induced SMD animal models using qRT-PCR, GeneMANIA analysis for key genes/pathways.
- Identification of transcription factors, ceRNA networks, drug candidates, and subsequent molecular docking and ADMET analysis.
Main Results:
- Fifteen hub genes were identified; qRT-PCR confirmed significant differential expression in 14 genes, including IL6, TNF, IGF1, STAT3, and IL10.
- The STAT3 gene and the JAK/STAT3 pathway were identified as crucial molecular targets and signaling pathways for SMD.
- Fluticasone demonstrated excellent performance in molecular docking and ADMET analyses, indicating therapeutic potential.
Conclusions:
- STAT3 and the JAK/STAT3 pathway are key targets for addressing skeletal muscle dysfunction and promoting functional recovery in burn patients.
- Fluticasone emerges as a promising drug candidate for treating burn-induced SMD, warranting further investigation.
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