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Updated: Jan 6, 2026

Author Spotlight: Segmentation and VR for Advanced Neurovascular Interventions
Published on: April 5, 2024
Artificial Intelligence-Driven 3-Dimensional Segmentation of Pediatric Brain Tumors Based on Navigated Intraoperative
Kevin Klein Gunnewiek1, Sander J E Eggermont1,2, Emma E Trouw1,2
1Princess Máxima Center for Pediatric Oncology, Utrecht, The Netherlands.
Background And Objectives:
Intraoperative ultrasound (iUS) is increasingly used in pediatric brain tumor surgery. However, accurate tumor tissue identification and localization within the patient with iUS remains challenging. Automatic tumor segmentation may overcome these difficulties by providing quicker, more consistent, and reliable image analysis. This study evaluated the feasibility of automatic 3-dimensional segmentation of pediatric brain tumors using navigated iUS.
Methods:
A retrospective analysis was conducted on 109 navigated iUS acquisitions from 60 pediatric patients who underwent neurosurgical tumor resection. 3-dimensional nnU-Net was trained on 79 preresectional iUS acquisitions with corresponding tumor segmentations. Evaluation was performed on 30 iUS acquisitions against segmentations validated by 2 neurosurgeons. Performance benchmarks were set at a minimum Dice Similarity Coefficient (DSC) of 0.85 and a maximum mean surface distance and 95th percentile Hausdorff distance of 5 mm.
Results:
The trained algorithm predicted tumor segmentations for all acquisitions in the test set, which met the predefined benchmark values with a median DSC of 0.89 (IQR: 0.13), a median mean surface distance of 1.1 mm (IQR: 1.0 mm), and a median 95th percentile Hausdorff distance of 5.6 mm (IQR: 3.5 mm). The lowest quartile of DSC values consisted of 5 patients, including craniopharyngiomas (n = 3) and high-grade gliomas (n = 2). Oversegmentation of the lateral ventricle as tumor was observed in 2 patients. In 1 high-grade glioma case, edema was misclassified as tumor because of unclear tumor boundaries.
Conclusion:
This study demonstrates that automatic segmentation of pediatric brain tumors using navigated iUS is feasible and achieved high performance in most cases, with few outliers that showed moderate performance in tumor prediction. Future efforts will focus on real-time segmentation of residual tumor tissue during tumor resection. Ultimately, real-time visualization of automatically segmented tumors in 3 dimensions could improve intraoperative navigation and support neurosurgical decision making.
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