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Updated: Jan 11, 2026

Imaging Cleared Embryonic and Postnatal Hearts at Single-cell Resolution
Published on: October 7, 2016
Hox3 Is Required for Post-Metamorphic Heart Development in Adult Ciona
Ryota Saito1, Tatsuki Hyodo1, Nene Kamakura1
1Department of Chemistry and Biotechnology, Faculty of Science and Technology, Kochi University, Kochi, Japan.
Insights
Hox3 is crucial for heart tube formation in Ciona robusta, regulating growth zone cells. Its expression in terminal heart regions suggests conserved cardiac patterning between ascidians and vertebrates.
Area of Science:
- Developmental Biology
- Comparative Genomics
- Cardiovascular Research
Background:
- Heart development post-metamorphosis in Ciona robusta is not well understood.
- The sub-terminal regions of the Ciona heart contain pacemaker and undifferentiated growth zone cells.
Purpose of the Study:
- Identify transcription factors in Ciona heart sub-terminal regions.
- Investigate the spatial expression and function of Hox3 in Ciona heart development.
Main Methods:
- RNA-Sequencing (RNA-Seq) to identify transcription factors.
- In situ hybridization for spatial expression analysis.
- TALEN-mediated gene disruption to assess Hox3 function.
Main Results:
- Hox3 showed the strongest predominant expression in both sub-terminal regions.
- Hox3 was spatially expressed in undifferentiated growth zone cells of the heart tube.
- Disruption of Hox3 led to irregular heart tube formation (swollen or shortened).
Conclusions:
- Hox3 plays a critical role in Ciona heart tube formation by regulating growth zone cell activity.
- Conserved Hox3 expression in terminal heart regions suggests partial conservation of cardiac patterning and pacemaker localization between ascidians and vertebrates.
Abstract:
Although the differentiation of cardiac progenitors during embryogenesis has been characterized in detail in the ascidian Ciona robusta, heart development after metamorphosis remains unclear. The sub-terminal regions at both ends of the Ciona heart harbor pacemaker cells, as well as undifferentiated cells located within the growth zone. We performed an RNA-Seq analysis to identify transcription factors predominantly expressed in the sub-terminal regions of the Ciona heart. Among the 17 transcription factors predominantly expressed in one or both of the sub-terminal regions, Hox3 showed the strongest expression in both. Since the role of Hox3 during Ciona heart development remained unknown, we investigated the spatial expression and function of Hox3. In situ hybridization revealed the expression of Hox3 in undifferentiated cells within the growth zone at both ends of the heart tube. The TALEN-mediated disruption of Hox3 in cardiac progenitors resulted in irregularly swollen or shortened heart tubes. These results suggest that Hox3 plays a crucial role in heart tube formation by regulating the activity of growth zone cells. Similar Hox3 expression in the terminal regions of ascidian and vertebrate hearts suggests the partial conservation of cardiac patterning and pacemaker localization.
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