Explainable machine learning model for classifying atherosclerotic cardiovascular disease in patients with metabolic

Zhengliang Li1, Xiaokai Chen2, Linlin Ren2

  • 1Department of Cardiology, The Affiliated Hospital of Qingdao University, Qingdao, Shandong, China.

Frontiers in Endocrinology
|November 17, 2025
PubMed

Insights

Machine learning models accurately predict atherosclerotic cardiovascular disease (ASCVD) risk in patients with metabolic dysfunction-associated steatotic liver disease (MASLD). These models, particularly Gradient Boosting, offer improved early risk stratification for ASCVD in MASLD.

Area of Science:

  • Cardiology
  • Hepatology
  • Medical Informatics

Background:

  • Metabolic dysfunction-associated steatotic liver disease (MASLD) significantly increases cardiovascular disease (CVD) mortality risk.
  • Traditional CVD risk predictors show limitations in MASLD patient populations.
  • Accurate ASCVD risk assessment is crucial for MASLD management.

Purpose of the Study:

  • Develop and validate machine learning (ML) models to classify prevalent atherosclerotic cardiovascular disease (ASCVD) risk in MASLD patients.
  • Enhance the interpretability of ML models using SHapley Additive exPlanations (SHAP) for clinical application.
  • Identify key predictive features for ASCVD in MASLD.

Main Methods:

  • Retrospective analysis of 590 MASLD patients.
  • Development of six ML models, including Gradient Boosting (GB), using LASSO regression for feature selection.
  • Model performance evaluated by AUC, accuracy, sensitivity, specificity, and F1 score.
  • SHAP analysis for feature importance interpretation.

Main Results:

  • The Gradient Boosting (GB) model demonstrated high performance with AUCs of 0.918 (training) and 0.817 (validation).
  • Key predictors identified by SHAP include the Cholesterol-HDL-Glucose (CHG) index, Castelli Risk Index II (CRI-II), lipoprotein(a) [Lp(a)], serum creatinine (Scr), and uric acid (UA).
  • ASCVD was prevalent in 73.6% of the study cohort.

Conclusions:

  • The developed GB model accurately identifies existing ASCVD in MASLD patients.
  • This ML model shows potential as a valuable tool for early ASCVD risk stratification in clinical practice.
  • SHAP analysis provides insights into the drivers of ASCVD risk in MASLD.
Abstract

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