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Updated: Jan 11, 2026

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Flow Cytometric Analysis of Biomarkers for Detecting Human Sperm Functional Defects
Published on: April 21, 2022
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Epigenetic Disruption as a Molecular Signature in Idiopathic Nonobstructive Azoospermia
Amir Masoud Firouzabadi1,2, Samaneh Harimi2, Parisa Heydari2,3
1Department of Biology, Ashk.C., Islamic Azad University, Ashkezar, Yazd, Iran.
American Journal of Men'S Health
|November 17, 2025
Summary
Epigenetic regulators DNA methyltransferase 3B (DNMT3B) and Zinc Finger CCHC-Type Containing 13 (ZCCHC13) show altered expression in idiopathic nonobstructive azoospermia (iNOA). These epigenetic biomarkers may help diagnose iNOA and guide future therapies.
Area of Science:
- Reproductive biology
- Epigenetics
- Molecular genetics
Background:
- Idiopathic nonobstructive azoospermia (iNOA) is diagnosed when no cause for sperm absence is found.
- Epigenetic alterations are implicated in spermatogenesis dysfunction.
Purpose of the Study:
- To compare gene expression of DNA methyltransferase (DNMT) 1 (DNMT1), DNMT3A, DNMT3B, and Zinc Finger CCHC-Type Containing 13 (ZCCHC13) in iNOA versus obstructive azoospermia (OA).
- To assess the diagnostic potential of these epigenetic regulators in iNOA.
Main Methods:
- Quantitative real-time PCR was used to analyze DNMT1, DNMT3A, DNMT3B, and ZCCHC13 expression in testicular tissue from 60 azoospermic men (30 iNOA, 30 OA).
- iNOA patients were stratified into successful (iNOA+) and unsuccessful (iNOA-) sperm retrieval groups based on microdissection testicular sperm extraction (micro-TESE).
- Receiver operating characteristic (ROC) analysis evaluated diagnostic accuracy.
Main Results:
- DNMT1 and ZCCHC13 expression were significantly lower in iNOA compared to OA (p = .01).
- DNMT3B expression was significantly higher in iNOA, especially in the iNOA- subgroup (p < .0001).
- DNMT3B demonstrated the highest diagnostic accuracy (AUC = 0.84), followed by ZCCHC13 (AUC = 0.69) and DNMT1 (AUC = 0.68).
Conclusions:
- Epigenetic dysregulation, particularly involving DNMT3B and ZCCHC13, contributes to spermatogenesis impairment in iNOA.
- These epigenetic biomarkers offer potential for molecularly distinguishing iNOA from OA and guiding therapeutic strategies.
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