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Microbial succession in human tissues postmortem: insights from 2bRAD-M sequencing.
Xin Huang1,2, Jianye Zeng1,2, Fan Yang3
1Institute of Forensic Science, Fudan University, Shanghai, People's Republic of China.
Microbiology Spectrum
|November 17, 2025
Summary
Human thanatomicrobiome research reveals organ-specific microbial shifts during decomposition. Microbial signatures in tissues change over postmortem intervals (PMI), offering potential biomarkers for PMI estimation in forensic science.
Area of Science:
- Microbiology
- Forensic Science
- Thanatomicrobiome Research
Background:
- Microbial communities are vital for decomposition, but human internal organ thanatomicrobiome patterns are underexplored.
- Previous studies focused on animal models or limited human sites (gut, skin), leaving gaps in postmortem microbial dynamics.
- Understanding postmortem microbial succession is crucial for forensic science and ecological research.
Purpose of the Study:
- To profile microbial succession across seven human tissues at various postmortem intervals (PMIs).
- To investigate the utility of 2bRAD-M sequencing for human thanatomicrobiome analysis.
- To identify potential microbial biomarkers for estimating PMI.
Main Methods:
- Utilized 2bRAD-M sequencing technology for microbial profiling.
- Analyzed microbial communities across seven human tissues (heart, liver, spleen, lung, kidney, calf muscle, gut).
- Examined samples from various postmortem intervals and compared frozen versus unfrozen cadavers.
Main Results:
- Significant variations in microbial community composition were observed across different organs and decomposition stages.
- Proteobacteria dominated early postmortem, followed by Firmicutes.
- Frozen and unfrozen cadavers showed divergent microbial shifts in the liver and spleen, with limited variation in other tissues.
Conclusions:
- Human thanatomicrobiome exhibits complex, organ-specific microbial trajectories.
- Microbial signatures show potential as biomarkers for estimating postmortem intervals.
- This study enhances understanding of postmortem microbial dynamics and forensic methodologies.
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