Serum miR-493-3p as a diagnostic biomarker and epigenetic regulator targeting DPY30 in pediatric acute lymphoblastic

Hong Yang1, Yong Xu2, Xiaoying Zhang3

  • 1Department of Pediatrics, China Aerospace Science & Industry Corporation 731 Hospital, Beijing, 100074, China.

Annals of Hematology
|November 17, 2025
PubMed

Insights

Serum microRNA-493-3p (miR-493-3p) is downregulated in pediatric acute lymphoblastic leukemia (ALL). Lower miR-493-3p levels indicate poor prognosis and can help diagnose ALL, suggesting a potential therapeutic target.

Area of Science:

  • Pediatric Oncology
  • Molecular Biology
  • Biomarker Discovery

Background:

  • Pediatric acute lymphoblastic leukemia (ALL) is the most common childhood cancer.
  • Identifying reliable biomarkers for ALL diagnosis and prognosis is crucial.

Purpose of the Study:

  • To investigate the diagnostic value of serum microRNA-493-3p (miR-493-3p) in pediatric ALL.
  • To explore the functional role of miR-493-3p in ALL pathogenesis.

Main Methods:

  • Serum miR-493-3p levels were quantified using qRT-PCR in 103 ALL patients and 85 healthy controls.
  • Bioinformatic analysis and dual-luciferase reporter assays identified DPY30 as a direct target of miR-493-3p.
  • Functional experiments assessed the impact of miR-493-3p and DPY30 on leukemic cell phenotypes.

Main Results:

  • Serum miR-493-3p was significantly downregulated in ALL patients (AUC=0.881) and associated with advanced risk and poor survival.
  • miR-493-3p directly targets DPY30, with inverse correlation observed in clinical samples.
  • Overexpression of miR-493-3p suppressed proliferation and invasion, and promoted apoptosis in ALL cells by targeting DPY30.

Conclusions:

  • Serum miR-493-3p is a promising noninvasive biomarker for pediatric ALL diagnosis and prognosis.
  • The miR-493-3p/DPY30 axis acts as a tumor suppressor mechanism in ALL.
  • Targeting the miR-493-3p/DPY30 pathway may offer a novel therapeutic strategy for ALL.