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Hippocampal Segmentation Performance on 7T MRI: Intensity-Based Accuracy Assessment with Paired 3T-7T Volume

Justin A Cramer1, Ichiro Ikuta2,3, Leslie C Baxter3

  • 1From the Department of Radiology (J.A.C., I.I., L.C.B., Y.Z.), Mayo Clinic, Scottsdale, Arizona cramer.justin@mayo.edu.

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|November 19, 2025
PubMed
Summary
This summary is machine-generated.

Hippocampal segmentation algorithms show variable accuracy at 7 Tesla (7T) MRI. Hippodeep performed best, but all algorithms underestimated volumes, necessitating a dedicated 7T normative database for clinical use.

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Area of Science:

  • Neuroimaging
  • Magnetic Resonance Imaging (MRI)

Background:

  • Clinical adoption of 7 Tesla (7T) MRI is growing.
  • Existing hippocampal segmentation algorithms are not trained on 7T data, limiting their clinical utility.
  • Performance of these algorithms at 7T is largely uncharacterized.

Purpose of the Study:

  • Evaluate the accuracy of commonly used hippocampal segmentation algorithms at 7T MRI.
  • Compare volumetric differences between paired 3T and 7T hippocampal segmentations.
  • Assess the impact of 7T underestimation on normative percentile shifts.

Main Methods:

  • Analyzed two retrospective datasets (269 studies for 7T accuracy, 39 subjects for 3T-7T comparison).
  • Tested six algorithms (AssemblyNet, e2dhipseg, FastSurfer, HippMapper, hippodeep, QuickNat) at 7T, with QuickNat excluded from 3T-7T comparison (NeuroQuant 5.0 added).
  • Quantified accuracy using voxel intensity-based correction metrics and assessed volume differences with Wilcoxon signed-rank test.

Main Results:

  • Hippodeep demonstrated the lowest total correction volume (0.58 mL) at 7T, indicating superior accuracy.
  • All tested algorithms produced significantly smaller hippocampal volumes at 7T compared to 3T (p < 0.001).
  • Mean absolute volume differences ranged from 0.19 mL (hippodeep) to 1.54 mL (HippMapper), with NeuroQuant showing a 0.54 mL difference and a 41-point percentile shift.

Conclusions:

  • Hippodeep exhibited the most consistent cross-field performance between 3T and 7T.
  • Consistent volumetric underestimation at 7T across algorithms poses challenges for clinical interpretation.
  • A dedicated 7T normative database is essential for accurate clinical application of hippocampal volumetry.