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One-class edge classification through heterogeneous hypergraph for causal discovery.

Marcos Paulo Silva Gôlo1, Ricardo Marcondes Marcacini2

  • 1Institute of Mathematical and Computer Sciences, University of Sao Paulo, São Carlos, São Paulo, Brazil. marcosgolo@usp.br.

Scientific Reports
|November 20, 2025
PubMed
Summary

We introduce eCHOLGA, a novel method for causal discovery from event pairs. It uses heterogeneous hypergraphs and language models to improve understanding of complex event interdependencies and causal relationships.

Keywords:
Event causal discoveryHeterogeneous graphsHypergraph for edge classificationOne-class learningText pair causal discovery

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Area of Science:

  • Artificial Intelligence
  • Natural Language Processing
  • Graph Neural Networks

Background:

  • Causal discovery from event pairs is crucial for understanding complex systems.
  • Large language models (LLMs) excel at event semantics but struggle with global event structure.
  • Existing graph-based methods lack relational expressiveness and can lead to disconnected structures.

Purpose of the Study:

  • To propose a novel method, eCHOLGA (edge Classification through Heterogeneous One-cLass Graph Autoencoder), for effective causal discovery from event pairs.
  • To leverage heterogeneous hypergraphs and LLM semantic features for enhanced causal relationship modeling.
  • To improve topological connectivity and enable informative edge representations using graph neural networks (GNNs).

Main Methods:

  • eCHOLGA utilizes heterogeneous hypergraphs, transforming relations into nodes and incorporating additional node/edge types.
  • Semantic features from LLMs are integrated into the graph structure for richer event and relation representation.
  • A one-class learning strategy is employed, requiring only positive causal examples for training, reducing labeling effort.

Main Results:

  • eCHOLGA demonstrates superior performance compared to state-of-the-art methods in causal discovery tasks.
  • The method enhances topological connectivity, enabling GNNs to learn more informative edge representations.
  • Experimental results validate the effectiveness of integrating LLM features and heterogeneous hypergraphs.

Conclusions:

  • eCHOLGA offers a promising approach for causal discovery in event pairs by effectively modeling complex interdependencies.
  • The method improves causal reasoning, interpretability, and reduces the need for extensive labeled data.
  • This work advances the field by providing a more expressive and connected graph-based framework for causal inference.