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TKC-MC: An Effective Strategy for Generating Heritable Heterozygous Mutations in Essential Genes in Rice.

Meilian Xu1, Lang Yan2,3, Min Zhu1

  • 1National Key Laboratory of Crop Genetic Improvement and National Centre of Plant Gene Research (Wuhan), Hubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China.

Plant Biotechnology Journal
|November 24, 2025
PubMed
Summary
This summary is machine-generated.

Researchers developed Transgene-Killer CRISPR (TKC)-mediated mismatch-spacer targeting (TKC-M) to create heterozygous mutations in essential rice genes. This method overcomes CRISPR/Cas9

Keywords:
CRISPR/Cas9TKCmismatch‐spacerricetransmission essential gene

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Area of Science:

  • Plant genetics
  • Gene editing technologies
  • Molecular biology

Background:

  • CRISPR/Cas9 is vital for gene function studies and crop improvement.
  • Essential genes require heterozygous mutations for plant survival and propagation.
  • Standard CRISPR/Cas9 struggles to produce heterozygous mutants for essential genes in rice.

Purpose of the Study:

  • To develop an efficient method for generating heritable heterozygous mutations in essential rice genes.
  • To overcome limitations of traditional gene editing for essential gene research.

Main Methods:

  • Designed Transgene-Killer CRISPR (TKC)-mediated mismatch-spacer targeting (TKC-M).
  • Utilized a transgenic offspring self-elimination TKC platform with engineered gRNA-target mismatches.
  • Tested single and dual mismatches at specific gRNA positions for varying target sensitivities.
  • Employed a TKC-M Cocktail (TKC-MC) with multiple gRNA configurations.

Main Results:

  • TKC-M successfully enriched heritable heterozygous and mosaic incomplete-edited T0 mutants.
  • Single-base mismatches at positions 11 or 17 were effective for sensitive targets.
  • Dual mismatches at positions 8 and 15 maximized heterozygotes for insensitive targets.
  • TKC-MC significantly increased the incomplete-edited mutant ratio compared to standard TKC.

Conclusions:

  • TKC-M provides an efficient strategy for generating heterozygous mutations in essential rice genes.
  • This method facilitates research on essential genes and the creation of comprehensive mutant libraries.
  • Establishes a technical foundation for plant genome-wide mutant library generation.