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Binding sites linkages can regulate a protein's function.  For example, enzyme activity is often regulated through a feedback mechanism where the end product of the biochemical process serves as an inhibitor.
Aspartate transcarbamoylase (ATCase) is a cytosolic enzyme that catalyzes the condensation of L-aspartate and carbamoyl phosphate to  N-carbamoyl-L-aspartate. This reaction is the first step in pyrimidine biosynthesis. UTP and CTP, the end products of the pyrimidine synthesis...
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Related Experiment Video

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Development of Inhibitors of Protein-protein Interactions through REPLACE: Application to the Design and Development Non-ATP Competitive CDK Inhibitors
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Development of Cell-Permeable Adenylosuccinate Lyase Inhibitor.

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  • 1Department of Biology, Johns Hopkins University, Baltimore, MD 21218, USA.

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|November 24, 2025
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Summary
This summary is machine-generated.

Researchers developed a cell-permeable inhibitor for adenylosuccinate lyase (ADSL), an enzyme linked to cancer and neurodevelopment. This new compound shows promise for studying ADSL

Keywords:
adenylosuccinate lyaseinhibitornucleotidescreening

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Area of Science:

  • Biochemistry
  • Enzyme Inhibition
  • Drug Discovery

Background:

  • Abnormal adenylosuccinate lyase (ADSL) activity is implicated in cancer and neurodevelopmental disorders.
  • A significant limitation in studying ADSL's role is the lack of cell-permeable inhibitors.

Purpose of the Study:

  • To develop a cell-permeable inhibitor of ADSL.
  • To identify and synthesize fragments of a previously identified lead compound (NF-449) with improved cell permeability.

Main Methods:

  • High-throughput screening to identify lead compounds.
  • Chemical synthesis of NF-449 fragments.
  • Enzyme inhibition assays using purified human ADSL.
  • Cell-based assays to determine IC50 values in HeLa cells.

Main Results:

  • A synthesized fragment, 2,2'-(1,3-phenylenebis(carbonylimino))-bisbenzenesulfonate, was identified as a competitive inhibitor of purified human ADSL (Ki = 0.4 µM).
  • The triethylammonium salt of this fragment demonstrated ADSL inhibition in HeLa cells with an IC50 of 0.4 µM.
  • The compound exhibits improved cell permeability compared to the original lead compound.

Conclusions:

  • A novel, cell-permeable ADSL inhibitor has been developed.
  • This compound is a valuable tool for in vitro studies of ADSL.
  • Further optimization may yield reagents suitable for in vivo research.