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Improved, annotated reference genome for the highly polyphagous moth Hyphantria cunea (Fall webworm).

William Maguire1, Mattheau Comerford1, Lily Shiue2

  • 1Department of Biology, University of Massachusetts Boston, Boston, MA, United States.

The Journal of Heredity
|November 25, 2025
PubMed
Summary
This summary is machine-generated.

A new, high-quality genome for the fall webworm (Hyphantria cunea) was assembled. This resource will advance research on insect herbivore diet breadth and the evolution of dietary generalism.

Keywords:
Erebidaegenomicsinsect herbivorelepidoptera

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Area of Science:

  • Genomics
  • Ecology
  • Evolutionary Biology

Background:

  • The fall webworm (Hyphantria cunea) is a highly polyphagous moth with a wide native and invasive range, utilizing over 600 plant species.
  • Its genetic diversity and variable host use make it a model for studying diet breadth, but a high-quality reference genome was lacking.

Purpose of the Study:

  • To generate a chromosome-scale, annotated reference genome for Hyphantria cunea.
  • To provide a valuable resource for studying the ecology, evolution, and genetics of dietary generalism in insect herbivores.

Main Methods:

  • De novo genome assembly using PacBioHiFi long reads and Omni-C proximity ligation sequencing.
  • Characterization of the genome assembly for continuity and completeness.

Main Results:

  • A de novo assembled genome of 0.572 gigabases with 321 scaffolds and an N50 of 14.6 Mb was produced.
  • The assembly achieved a high BUSCO complete score of 99.1%, indicating excellent completeness.
  • This represents the first genome for the genus Hyphantria and the third for the family Erebidae.

Conclusions:

  • The newly assembled and annotated genome significantly improves upon previous references.
  • This genome resource will facilitate future research into the genetic and evolutionary basis of diet breadth in insect herbivores.