Identification of novel pathogenic variants in the PHYH gene and extending the phenotypic range in Refsum disease

Cheryl Y Gregory-Evans1,2, Anna Lehman2, Andre Mattman3

  • 1Departments of Ophthalmology and Visual Sciences, University of British Columbia, Vancouver, Canada.

Ophthalmic Genetics
|November 25, 2025
PubMed

Insights

Genetic testing identified novel variants in PHYH and PHYN, confirming Refsum disease in two patients with inherited retinal dystrophy. Early diagnosis and dietary changes are crucial for managing Refsum disease complications.

Area of Science:

  • Ophthalmology
  • Medical Genetics
  • Metabolic Disorders

Background:

  • Inherited retinal dystrophies (IRDs) encompass a group of genetic disorders affecting vision.
  • Refsum disease is a rare metabolic disorder characterized by the accumulation of phytanic acid.
  • Ocular manifestations are common in Refsum disease, but specific associations with macular dystrophy are less understood.

Purpose of the Study:

  • To investigate the genetic basis of suspected inherited retinal dystrophy in two patients.
  • To identify novel genetic variants associated with retinal disease.
  • To establish a potential link between macular dystrophy and Refsum disease.

Main Methods:

  • Ophthalmological examination and referral for genetic testing.
  • Molecular genetic analysis to identify pathogenic variants in relevant genes.
  • Biochemical testing to measure phytanic acid levels for Refsum disease diagnosis.

Main Results:

  • Patient 1 (P1) presented with retinitis pigmentosa and was found to have novel pathogenic variants in PHYH.
  • Patient 2 (P2) presented with macular pigmentary changes and had novel variants in PHYN.
  • Both patients exhibited elevated phytanic acid levels, confirming Refsum disease, and shared systemic features.

Conclusions:

  • This study reports, for the first time, an association between macular dystrophy and Refsum disease.
  • Genetic identification of variants in PHYH and PHYN contributes to understanding the genetic landscape of IRDs.
  • Early diagnosis of Refsum disease allows for dietary modification to improve prognosis, though visual recovery may be limited.
Abstract

Related Concept Videos

Principles of Pharmacogenetics: Types of Genetic Variants01:27

Principles of Pharmacogenetics: Types of Genetic Variants

The human genome is over 99.9% identical between individuals, yet genetic differences exist at millions of bases. The human genome contains approximately 3 million variant positions per individual, many of which are heterozygous, contributing to genetic diversity and individual traits. Genetic variations include single-nucleotide polymorphisms (SNPs), insertions, deletions, and copy number variations (CNVs).SNPs, the most common variation, involve single-base changes in DNA. These can be...
143
Pharmacogenetic Phenotypes: Alterations in Pharmacokinetics, Drug Targets and Biologic Milieu01:29

Pharmacogenetic Phenotypes: Alterations in Pharmacokinetics, Drug Targets and Biologic Milieu

Genetic variations significantly influence drug response through pharmacokinetics, receptor interactions, and biologic milieu modifications. Pharmacokinetic alterations impact drug metabolism and clearance, affecting efficacy and toxicity. Variants in drug-metabolizing enzymes, such as CYP2C9 and CYP2C19, alter drug activation and elimination. For example, CYP2C9 loss-of-function variants require lower warfarin doses to prevent excessive bleeding, while CYP2C19 variants reduce clopidogrel...
160
Pharmacogenomics: Identification of New Drug Targets01:29

Pharmacogenomics: Identification of New Drug Targets

Advances in genomics have profoundly influenced drug discovery by increasing both the speed and accuracy of pharmaceutical development. Pharmacogenomics, which examines how genetic variation influences drug response, facilitates the identification of novel therapeutic targets and enables patient stratification for personalized treatment. These strategies contribute to improved drug efficacy, minimized adverse effects, and more efficient clinical trial design.Mapping genetic differences...
129