Related Experiment Video
Updated: Jan 10, 2026

05:35
Immunofluorescence Analysis of Endogenous and Exogenous Centromere-kinetochore Proteins
Published on: March 3, 2016
15.6K
Heterochromatin boundaries maintain centromere position, size and number
Ben L Carty1, Danilo Dubocanin2, Marina Murillo-Pineda1,3
1Dept of Biochemistry, University of Oxford, Oxford, UK.
Nature Structural & Molecular Biology
|November 25, 2025
Summary
Heterochromatin boundaries, maintained by specific H3K9 methyltransferases, are crucial for defining centromere size and number. Loss of these boundaries leads to centromere expansion and ectopic centromere formation.
Area of Science:
- Epigenetics
- Molecular Biology
- Genetics
Background:
- Centromeres, marked by centromere protein A (CENP-A), are essential for chromosome segregation.
- Centromeric chromatin is a low-methylation domain within hypermethylated pericentric heterochromatin.
Purpose of the Study:
- To elucidate the molecular mechanisms by which heterochromatin dictates centromere position, size, and number.
- To investigate the roles of H3K9 methyltransferases in maintaining centromeric heterochromatin boundaries.
Main Methods:
- Single-molecule epigenomics.
- Analysis of H3K9me3 methyltransferases (SUV39H1/H2, SETDB1) and SUZ12.
- Assessment of CENP-A domain dynamics and DNA methylation patterns.
Main Results:
- SUV39H1/H2, SETDB1, and SUZ12 are critical for maintaining H3K9me3 boundaries at centromeres.
- Loss of these boundaries results in CENP-A domain expansion/repositioning.
- Erosion of DNA methylation and nucleation of ectopic CENP-A domains occur upon boundary loss.
Conclusions:
- Specific H3K9 methyltransferases maintain centromere integrity by defining heterochromatin boundaries.
- These specialized methyltransferases are vital for controlling centromere size and preventing ectopic centromere formation.
Related Concept Videos
Histone Variants at the Centromere
4.9K
Histone variants are the histone proteins with structural and sequence variations. These variants may be regarded as “mutant” forms that replace their canonical histone counterparts in the nucleosomes. Specific post-translational modifications on the histone variants enable further chromatin complexity and regulate tissue-specific gene expression. The most common histone variants are from histone H2A, H2B, and linker histone H1 families. However, several variants of histone H3...
4.9K
Chromosome Structure
25.8K
A functional eukaryotic chromosome must contain three elements: a centromere, telomeres, and numerous origins of replication.
The centromere is a DNA sequence that links sister chromatids. This is also where kinetochores, protein complexes to which spindle microtubules attach, are constructed after the chromosome is replicated. The kinetochores allow the spindle microtubules to move the chromosomes within the cell during cell division.
Telomeres consist of non-coding repetitive nucleotide...
The centromere is a DNA sequence that links sister chromatids. This is also where kinetochores, protein complexes to which spindle microtubules attach, are constructed after the chromosome is replicated. The kinetochores allow the spindle microtubules to move the chromosomes within the cell during cell division.
Telomeres consist of non-coding repetitive nucleotide...
25.8K
Chromosome Structure
6.1K
6.1K
Heterochromatin
17.8K
The extent of chromatin compaction can be studied by staining chromatin using specific DNA binding dyes. Under the microscope, the dense-compacted regions that take up more dye are called heterochromatin. Heterochromatin is further classified into two forms – constitutive heterochromatin and facultative heterochromatin.
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at...
Constitutive heterochromatin: It is a highly compact region of chromatin that is mostly concentrated in the centromere and telomere. Unlike euchromatin, the amino acid at...
17.8K
Heterochromatin
4.6K
4.6K
Attachment of Sister Chromatids
3.9K
As cells progress into mitosis, the nuclear envelope breaks down, and the condensed chromosomes are exposed to the array of bipolar microtubules of the mitotic spindle. The kinetochore, a large, disc-shaped protein complex, is present at the centromere region of the sister chromatids and acts as a binding site for the microtubules. Usually, the plus-end of a single microtubule is embedded within the kinetochore. However, some kinetochores first establish lateral contact with the side-wall...
3.9K

