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M3ASD: Integrating Multi-Atlas and Multi-Center Data via Multi-View Low-Rank Graph Structure Learning for Autism

Shuo Yang1, Zuohao Yin1, Yue Ma2

  • 1College of Information Science and Technology & Artificial Intelligence, Nanjing Forestry University, Nanjing 210037, China.

Brain Sciences
|November 27, 2025
PubMed
Summary

This study introduces M³ASD, a novel method for diagnosing Autism Spectrum Disorder (ASD) using multi-center resting-state fMRI data. The approach enhances diagnostic accuracy by integrating multi-atlas brain networks and addressing data heterogeneity.

Keywords:
ABIDEautism spectrum disordergraph structure learninglow-rank representationmulti-atlas fusionmulti-center datamulti-view learningrs-fMRI

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Area of Science:

  • Neuroimaging
  • Computational Neuroscience
  • Biomedical Engineering

Background:

  • Autism Spectrum Disorder (ASD) is a complex neurodevelopmental condition requiring accurate diagnosis for timely intervention.
  • Resting-state functional magnetic resonance imaging (rs-fMRI) is vital for ASD diagnosis but faces challenges with data heterogeneity across multiple centers and reliance on single brain atlases.
  • Existing methods often overlook variations in imaging devices, acquisition parameters, and processing pipelines, limiting diagnostic generalizability.

Purpose of the Study:

  • To develop an automated diagnostic method for ASD that integrates multi-atlas and multi-center rs-fMRI data.
  • To address data heterogeneity issues inherent in multi-center neuroimaging studies.
  • To improve the accuracy and interpretability of ASD diagnosis using advanced graph structure learning.

Main Methods:

  • A multi-view, low-rank subspace graph structure learning framework (M³ASD) was proposed.
  • Functional connectivity matrices were constructed using multiple brain atlases from multi-center neuroimaging data.
  • Low-rank subspace projection and multi-view consistency regularization were employed to mitigate heterogeneity and extract discriminative features.

Main Results:

  • The M³ASD method achieved an accuracy of 83.21% on the ABIDE-I dataset.
  • The model demonstrated superior performance compared to existing methods for ASD diagnosis.
  • The approach successfully identified common functional brain connections across different atlases.

Conclusions:

  • The M³ASD method effectively improves diagnostic accuracy for ASD using multi-center rs-fMRI data.
  • The framework enhances the interpretability of ASD diagnosis by revealing common functional brain network patterns.
  • Validation on the ABIDE dataset confirms the robustness and effectiveness of the proposed approach.