Multi-label classification for multi-temporal, multi-spatial coral reef condition monitoring using vision foundation
Xinlei Shao1, Hongruixuan Chen2, Fan Zhao3
1Department of Socio-Cultural Environmental Studies, Graduate School of Frontier Sciences, The University of Tokyo, Kashiwa, Chiba, 277-8563, Japan.
Marine Pollution Bulletin
|November 27, 2025
Summary
This study introduces an efficient method using DINOv2 and Low-Rank Adaptation (LoRA) to classify coral reef conditions from underwater images. The approach improves accuracy while significantly reducing computational costs for conservation efforts.
Area of Science:
- Marine Biology
- Computer Science
- Artificial Intelligence
Background:
- Coral reefs provide vital ecosystem services but are threatened by climate change and human activities.
- Deep learning models struggle with complex underwater images for coral reef condition classification.
- Vision foundation models offer high accuracy but require extensive resources for fine-tuning.
Purpose of the Study:
- To develop an efficient method for classifying coral reef conditions using foundation models.
- To address the computational and carbon footprint challenges of fine-tuning large models.
- To evaluate the performance and generalizability of adapted foundation models for ecological image analysis.
Main Methods:
- Integration of the DINOv2 vision foundation model with Low-Rank Adaptation (LoRA) fine-tuning.
- Utilized multi-temporal underwater images from 15 dive sites at Koh Tao, Thailand.
- Employed universal labeling standards for citizen science-based conservation programs.
Main Results:
- The DINOv2-LoRA model achieved a superior match ratio of 64.77%, outperforming conventional models (60.34%).
- LoRA significantly reduced trainable parameters from 1136.50M to 5.91M.
- Demonstrated exceptional generalizability across different seasons and spatial settings through transfer learning.
Conclusions:
- The DINOv2-LoRA approach offers an efficient and accurate method for coral reef condition classification.
- This study is the first to explore efficient foundation model adaptation for multi-label coral reef classification in multi-temporal and multi-spatial contexts.
- The proposed method provides a valuable tool for coral reef monitoring, conservation, and management.
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